Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1488

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,705,600	+		Echvi_1487	0.42	-0.3
1,705,601	-		Echvi_1487	0.42	-0.1
1,705,625	+		Echvi_1487	0.44	+0.4
1,705,630	+		Echvi_1487	0.44	-2.3
1,705,631	-		Echvi_1487	0.44	-0.7
1,705,631	-		Echvi_1487	0.44	-1.1
1,705,662	+		Echvi_1487	0.46	-1.4
1,705,687	+		Echvi_1487	0.48	-1.2
1,705,688	-		Echvi_1487	0.48	-0.8
1,705,692	+		Echvi_1487	0.48	+0.1
1,705,712	-		Echvi_1487	0.49	+0.2
1,705,742	-		Echvi_1487	0.51	-2.1
1,705,742	-		Echvi_1487	0.51	-0.4
1,705,758	-		Echvi_1487	0.52	-2.4
1,705,814	+		Echvi_1487	0.55	-0.9
1,705,981	+		Echvi_1487	0.65	-0.5
1,705,981	+		Echvi_1487	0.65	-0.1
1,706,018	-		Echvi_1487	0.67	+1.1
1,706,045	+		Echvi_1487	0.69	-0.5
1,706,068	+		Echvi_1487	0.70	-0.4
1,706,068	+		Echvi_1487	0.70	-1.4
1,706,072	-		Echvi_1487	0.70	+0.3
1,706,081	-		Echvi_1487	0.71	-0.5
1,706,081	-		Echvi_1487	0.71	-1.2
1,706,116	+		Echvi_1487	0.73	+0.9
1,706,116	+		Echvi_1487	0.73	-0.3
1,706,116	+		Echvi_1487	0.73	-0.1
1,706,116	+		Echvi_1487	0.73	-1.2
1,706,117	-		Echvi_1487	0.73	-1.1
1,706,117	-		Echvi_1487	0.73	-0.2
1,706,117	-		Echvi_1487	0.73	-0.2
1,706,162	+		Echvi_1487	0.76	-1.7
1,706,162	+		Echvi_1487	0.76	-2.6
1,706,162	+		Echvi_1487	0.76	+1.2
1,706,163	-		Echvi_1487	0.76	-1.4
1,706,174	-		Echvi_1487	0.76	-1.5
1,706,182	+		Echvi_1487	0.77	-1.2
1,706,182	+		Echvi_1487	0.77	+0.2
1,706,183	-		Echvi_1487	0.77	+1.1
1,706,203	-		Echvi_1487	0.78	-0.6
1,706,203	-		Echvi_1487	0.78	+0.2
1,706,254	+		Echvi_1487	0.81	-0.6
1,706,254	+		Echvi_1487	0.81	+0.0
1,706,255	-		Echvi_1487	0.81	-0.3
1,706,277	+		Echvi_1487	0.83	-1.6
1,706,277	+		Echvi_1487	0.83	-0.7
1,706,284	-		Echvi_1487	0.83	-2.2
1,706,284	-		Echvi_1487	0.83	-0.1
1,706,309	+		Echvi_1487	0.84	-0.4
1,706,309	+		Echvi_1487	0.84	-1.5
1,706,310	-		Echvi_1487	0.85	-1.5
1,706,310	-		Echvi_1487	0.85	-2.4
1,706,310	-		Echvi_1487	0.85	-0.0
1,706,336	+		Echvi_1487	0.86	-0.4
1,706,338	+		Echvi_1487	0.86	-0.6
1,706,338	+		Echvi_1487	0.86	-0.7
1,706,338	+				-0.4
1,706,344	+		Echvi_1487	0.87	-0.3
1,706,345	-		Echvi_1487	0.87	+1.3
1,706,345	-		Echvi_1487	0.87	-0.6
1,706,345	-		Echvi_1487	0.87	-0.4
1,706,357	-		Echvi_1487	0.87	-1.2
1,706,360	+		Echvi_1487	0.87	+0.4
1,706,360	+		Echvi_1487	0.87	-0.7
1,706,360	+		Echvi_1487	0.87	+1.0
1,706,360	+		Echvi_1487	0.87	-0.9
1,706,361	-		Echvi_1487	0.88	-0.7
1,706,383	-		Echvi_1487	0.89	-0.8
1,706,412	+				-0.6
1,706,412	+				+0.4
1,706,413	-				-1.2
1,706,413	-				-1.7
1,706,413	-				-0.6
1,706,413	-				-0.9
1,706,418	-				-0.3
1,706,448	+				-3.2
1,706,449	-				-3.4
1,706,449	-				-1.1
1,706,449	-				-0.0
1,706,467	+				+0.3
1,706,467	+				-0.0
1,706,529	+				+0.1
1,706,571	+				+0.5
1,706,571	+				+0.4
1,706,654	+				-0.5
1,706,697	-		Echvi_1488	0.15	-1.2
1,706,697	-		Echvi_1488	0.15	-0.7
1,706,743	+		Echvi_1488	0.22	-0.1
1,706,866	+		Echvi_1488	0.41	+0.3
1,706,867	-		Echvi_1488	0.41	-0.7
1,706,867	-		Echvi_1488	0.41	+1.0
1,706,867	-		Echvi_1488	0.41	-2.7
1,706,867	-		Echvi_1488	0.41	-0.9
1,706,923	-		Echvi_1488	0.49	-1.1
1,706,931	-		Echvi_1488	0.50	-0.1
1,706,952	+		Echvi_1488	0.54	-0.6
1,706,952	+		Echvi_1488	0.54	-0.7
1,706,953	-		Echvi_1488	0.54	-0.3
1,706,953	-		Echvi_1488	0.54	+0.1
1,706,953	-		Echvi_1488	0.54	-0.8
1,706,953	-		Echvi_1488	0.54	-0.0
1,707,030	-		Echvi_1488	0.65	-0.2
1,707,036	+		Echvi_1488	0.66	-0.8
1,707,048	+		Echvi_1488	0.68	-1.0
1,707,048	+		Echvi_1488	0.68	+0.8
1,707,065	-		Echvi_1488	0.71	-0.6
1,707,093	+		Echvi_1488	0.75	-0.4
1,707,128	+		Echvi_1488	0.80	-1.4
1,707,162	+		Echvi_1488	0.85	-0.6
1,707,231	+				+0.1
1,707,235	-				+0.7
1,707,236	+				-1.5
1,707,236	+				-1.2
1,707,265	+				-0.6
1,707,266	-				+0.3
1,707,266	-				-0.3
1,707,268	+				-0.3
1,707,268	+				-1.3
1,707,268	+				-1.4
1,707,269	-				-0.2
1,707,269	-				-1.3
1,707,270	+				-0.1
1,707,270	+				-0.4
1,707,271	-				+2.3
1,707,271	-				+0.5
1,707,271	-				-0.0
1,707,349	-				+0.5
1,707,351	-				+1.8
1,707,388	+				-1.7
1,707,389	-				-1.5
1,707,389	-				+0.2
1,707,458	-				+0.4
1,707,473	+				+0.2
1,707,473	+				+0.6
1,707,473	+				-1.9
1,707,473	+				-0.4
1,707,474	-				-0.1
1,707,474	-				-0.7
1,707,477	-				+0.2
1,707,505	+				+1.1
1,707,506	-				-2.0
1,707,509	+				+0.6
1,707,509	+				-0.6
1,707,509	+				+0.0
1,707,510	-				-0.9
1,707,570	-				-3.3
1,707,570	-				-2.2
1,707,570	-				+0.8
1,707,570	-				-0.3
1,707,578	+				+0.3
1,707,578	+				-1.5
1,707,590	-				+0.3
1,707,642	+		Echvi_1489	0.12	-0.2
1,707,773	+		Echvi_1489	0.24	+0.1
1,707,796	+		Echvi_1489	0.26	+0.7
1,707,796	+		Echvi_1489	0.26	+0.7
1,707,797	-		Echvi_1489	0.26	+2.0
1,707,797	-		Echvi_1489	0.26	+0.4
1,707,797	-		Echvi_1489	0.26	-0.9
1,707,806	-		Echvi_1489	0.27	+0.5
1,707,821	+		Echvi_1489	0.28	-2.4
1,707,821	+		Echvi_1489	0.28	-1.2
1,707,899	+		Echvi_1489	0.35	+0.1
1,707,900	-		Echvi_1489	0.35	+0.3
1,707,923	+		Echvi_1489	0.37	-0.6
1,707,923	+		Echvi_1489	0.37	+0.4
1,707,924	-		Echvi_1489	0.37	-0.3
1,707,924	-		Echvi_1489	0.37	-0.4
1,707,924	-		Echvi_1489	0.37	+1.2
1,708,046	+		Echvi_1489	0.48	-0.7
1,708,047	-		Echvi_1489	0.49	+0.0
1,708,131	-		Echvi_1489	0.56	-0.2
1,708,178	+		Echvi_1489	0.60	+0.5