Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1245

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,431,768	+		Echvi_1244	0.86	-0.1
1,431,768	+		Echvi_1244	0.86	-1.1
1,431,768	+		Echvi_1244	0.86	-0.6
1,431,769	-		Echvi_1244	0.86	+1.3
1,431,769	-		Echvi_1244	0.86	+1.3
1,431,769	-		Echvi_1244	0.86	-0.4
1,431,800	+		Echvi_1244	0.87	+0.2
1,431,876	-		Echvi_1244	0.89	-3.4
1,431,880	+		Echvi_1244	0.89	+0.3
1,431,880	+		Echvi_1244	0.89	-0.8
1,431,880	+		Echvi_1244	0.89	-0.8
1,431,880	+		Echvi_1244	0.89	-1.3
1,431,880	+		Echvi_1244	0.89	-1.4
1,431,881	-		Echvi_1244	0.89	-0.1
1,431,881	-		Echvi_1244	0.89	-0.9
1,431,881	-		Echvi_1244	0.89	-1.7
1,431,881	-		Echvi_1244	0.89	+0.3
1,431,881	-		Echvi_1244	0.89	+0.5
1,431,881	-		Echvi_1244	0.89	+0.5
1,431,881	-		Echvi_1244	0.89	-1.2
1,431,896	-		Echvi_1244	0.89	-0.2
1,431,921	+		Echvi_1244	0.90	+0.5
1,431,921	+		Echvi_1244	0.90	+0.2
1,431,922	-		Echvi_1244	0.90	-1.7
1,431,922	-		Echvi_1244	0.90	-0.2
1,431,922	-		Echvi_1244	0.90	-0.9
1,431,922	-		Echvi_1244	0.90	+0.7
1,431,922	-		Echvi_1244	0.90	+1.4
1,431,922	-		Echvi_1244	0.90	-0.7
1,431,935	+				+0.7
1,431,935	+				-0.2
1,431,935	+				-0.2
1,431,935	+				-2.1
1,431,936	-				-0.1
1,431,936	-				-1.5
1,431,936	-				-0.5
1,431,936	-				-1.1
1,431,936	-				-0.4
1,431,969	+				-0.7
1,431,969	+				+0.9
1,431,970	-				+1.4
1,431,970	-				-0.8
1,431,975	+				+0.4
1,431,975	+				+1.9
1,431,975	+				-0.5
1,431,976	-				-0.5
1,431,976	-				-0.4
1,432,083	-				-0.5
1,432,086	+				+3.5
1,432,086	+				+0.1
1,432,086	+				-0.4
1,432,087	-				+0.1
1,432,087	-				-0.4
1,432,119	+				+0.0
1,432,120	-				+1.5
1,432,120	-				-1.9
1,432,126	+				-0.2
1,432,126	+				-0.9
1,432,126	+				-0.8
1,432,127	-				+1.6
1,432,170	+				-3.0
1,432,170	+				-1.7
1,432,170	+				-2.7
1,432,170	+				-1.5
1,432,171	-				+0.3
1,432,171	-				+0.7
1,432,226	+				-0.9
1,432,226	+				-0.4
1,432,271	+				+0.2
1,432,271	+				-0.3
1,432,272	-				-0.8
1,432,272	-				+1.0
1,432,275	+				-1.2
1,432,276	-				+2.1
1,432,366	+				+0.4
1,432,367	-				-0.5
1,432,369	-				+0.9
1,432,369	-				-0.8
1,432,383	-				-0.5
1,432,397	-				+1.5
1,432,868	+				-1.1
1,432,868	+				-0.2
1,432,869	-				-1.0
1,432,873	-				+0.1
1,432,873	-				+1.2
1,432,873	-				+0.3
1,432,883	-				-0.4
1,432,883	-				-2.0
1,432,926	-				-0.5
1,432,926	-				-0.5
1,432,926	-				+1.1
1,432,926	-				-1.1
1,432,974	+				-1.1
1,433,019	-		Echvi_1246	0.11	+2.4
1,433,019	-		Echvi_1246	0.11	-1.9
1,433,256	+		Echvi_1246	0.29	-1.7
1,433,257	-		Echvi_1246	0.29	-0.2
1,433,267	+		Echvi_1246	0.29	-0.5
1,433,267	+		Echvi_1246	0.29	-1.1
1,433,267	+		Echvi_1246	0.29	-0.0
1,433,268	-		Echvi_1246	0.29	-2.2
1,433,268	-		Echvi_1246	0.29	-0.4
1,433,268	-		Echvi_1246	0.29	-1.4
1,433,319	-		Echvi_1246	0.33	-1.5
1,433,415	+		Echvi_1246	0.40	+1.5
1,433,416	-		Echvi_1246	0.40	-2.1
1,433,416	-		Echvi_1246	0.40	-0.2
1,433,451	+		Echvi_1246	0.43	-3.4
1,433,494	+		Echvi_1246	0.46	-1.6
1,433,494	+		Echvi_1246	0.46	-0.7
1,433,516	+		Echvi_1246	0.48	-1.8
1,433,516	+		Echvi_1246	0.48	-2.7
1,433,517	-		Echvi_1246	0.48	-0.1
1,433,581	+		Echvi_1246	0.53	-1.1
1,433,593	+		Echvi_1246	0.53	-2.7
1,433,671	+		Echvi_1246	0.59	-3.1
1,433,671	+		Echvi_1246	0.59	-1.3
1,433,671	+		Echvi_1246	0.59	-0.1
1,433,672	-		Echvi_1246	0.59	-1.8
1,433,672	-		Echvi_1246	0.59	-0.3
1,433,672	-		Echvi_1246	0.59	-0.2
1,433,673	+		Echvi_1246	0.59	-3.9
1,433,720	+		Echvi_1246	0.63	-1.7
1,433,783	-		Echvi_1246	0.68	-1.1
1,433,792	-		Echvi_1246	0.68	-1.8
1,433,811	+		Echvi_1246	0.70	-3.2