Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1244

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,426,906	+		Echvi_1243	0.34	-0.7
1,426,940	+		Echvi_1243	0.36	-0.6
1,426,940	+		Echvi_1243	0.36	+0.2
1,427,035	+		Echvi_1243	0.43	-0.5
1,427,036	-		Echvi_1243	0.43	-2.2
1,427,120	+		Echvi_1243	0.49	+1.7
1,427,121	-		Echvi_1243	0.49	-0.4
1,427,326	+		Echvi_1243	0.62	-0.6
1,427,327	-		Echvi_1243	0.63	+1.5
1,427,500	-		Echvi_1243	0.74	+0.1
1,427,500	-		Echvi_1243	0.74	+0.0
1,427,564	+		Echvi_1243	0.79	-0.5
1,427,564	+		Echvi_1243	0.79	-1.1
1,427,627	-		Echvi_1243	0.83	-0.4
1,427,680	+		Echvi_1243	0.86	-1.4
1,427,695	+		Echvi_1243	0.87	-1.8
1,427,696	-		Echvi_1243	0.87	+0.4
1,427,792	+				-1.1
1,427,792	+				-0.7
1,427,792	+				+0.2
1,427,793	-				-1.1
1,427,793	-				+2.0
1,427,793	-				+2.5
1,427,795	-				-0.5
1,427,831	-				-1.1
1,427,840	+				+0.0
1,427,841	-				-0.8
1,427,851	+				+0.0
1,427,884	+				-0.7
1,427,884	+				+0.3
1,427,884	+				-0.9
1,427,884	+				-2.0
1,427,884	+				+0.0
1,427,944	+				-1.2
1,427,958	+				+0.5
1,427,958	+				-0.1
1,428,017	+				-0.8
1,428,096	+				+0.1
1,428,096	+				+0.4
1,428,096	+				+0.3
1,428,096	+				-0.3
1,428,097	-				-0.5
1,428,140	-				+0.2
1,428,217	+				-1.3
1,428,217	+				-2.7
1,428,217	+				+0.5
1,428,307	+				-1.2
1,428,307	+				-1.0
1,428,307	+				-2.4
1,428,308	-				-0.1
1,428,332	-				-2.0
1,428,359	+		Echvi_1244	0.11	-0.2
1,428,359	+		Echvi_1244	0.11	-1.3
1,428,394	+		Echvi_1244	0.11	-1.8
1,428,433	+		Echvi_1244	0.12	+0.4
1,428,433	+		Echvi_1244	0.12	+0.4
1,428,465	+		Echvi_1244	0.13	-0.8
1,428,649	-		Echvi_1244	0.17	+0.7
1,428,688	-		Echvi_1244	0.18	-0.3
1,428,724	+		Echvi_1244	0.19	-0.1
1,428,724	+		Echvi_1244	0.19	-1.1
1,428,724	+		Echvi_1244	0.19	-0.2
1,428,724	+		Echvi_1244	0.19	+0.6
1,428,728	+		Echvi_1244	0.19	+1.4
1,428,770	+		Echvi_1244	0.20	-1.8
1,428,837	+		Echvi_1244	0.21	-0.1
1,428,865	-		Echvi_1244	0.22	+0.3
1,429,016	+		Echvi_1244	0.25	-1.4
1,429,016	+		Echvi_1244	0.25	+1.7
1,429,016	+		Echvi_1244	0.25	+0.2
1,429,016	+		Echvi_1244	0.25	-0.3
1,429,017	-		Echvi_1244	0.25	+1.0
1,429,017	-		Echvi_1244	0.25	-0.5
1,429,017	-		Echvi_1244	0.25	+2.0
1,429,139	+		Echvi_1244	0.28	-1.5
1,429,139	+		Echvi_1244	0.28	-2.6
1,429,140	-		Echvi_1244	0.28	-1.4
1,429,140	-		Echvi_1244	0.28	+0.3
1,429,350	-		Echvi_1244	0.33	+0.0
1,429,369	+		Echvi_1244	0.33	-0.4
1,429,369	+		Echvi_1244	0.33	+0.3
1,429,369	+		Echvi_1244	0.33	-3.9
1,429,369	+		Echvi_1244	0.33	+2.8
1,429,375	-		Echvi_1244	0.33	-0.1
1,429,404	-		Echvi_1244	0.34	+1.1
1,429,427	+		Echvi_1244	0.34	+3.1
1,429,428	-		Echvi_1244	0.34	+0.9
1,429,455	+		Echvi_1244	0.35	-1.1
1,429,456	-		Echvi_1244	0.35	-0.5
1,429,491	+		Echvi_1244	0.36	-1.5
1,429,492	-		Echvi_1244	0.36	+0.1
1,429,539	+		Echvi_1244	0.37	-0.2
1,429,539	+		Echvi_1244	0.37	-0.7
1,429,539	+		Echvi_1244	0.37	-0.3
1,429,561	+		Echvi_1244	0.37	+0.9
1,429,561	+		Echvi_1244	0.37	+0.3
1,429,562	-		Echvi_1244	0.37	+1.1
1,429,635	+		Echvi_1244	0.39	-1.4
1,429,636	-		Echvi_1244	0.39	-0.3
1,429,794	+		Echvi_1244	0.42	+1.8
1,429,794	+		Echvi_1244	0.42	-0.2
1,429,795	-		Echvi_1244	0.42	+0.4
1,429,872	-		Echvi_1244	0.44	-0.8
1,429,872	-		Echvi_1244	0.44	-0.4
1,429,875	+		Echvi_1244	0.44	+0.5
1,429,897	+		Echvi_1244	0.45	+0.6
1,429,991	-		Echvi_1244	0.47	+0.4
1,429,991	-		Echvi_1244	0.47	+0.0
1,430,023	+		Echvi_1244	0.48	+0.9
1,430,023	+		Echvi_1244	0.48	-0.9
1,430,024	-		Echvi_1244	0.48	+0.5
1,430,030	-		Echvi_1244	0.48	-2.0
1,430,040	-		Echvi_1244	0.48	+0.1
1,430,109	-		Echvi_1244	0.49	-0.7
1,430,205	+		Echvi_1244	0.52	-0.2
1,430,268	+		Echvi_1244	0.53	-0.1
1,430,269	-		Echvi_1244	0.53	+0.6
1,430,323	+		Echvi_1244	0.54	-3.0
1,430,433	+		Echvi_1244	0.57	-1.0
1,430,434	-		Echvi_1244	0.57	-0.4
1,430,434	-		Echvi_1244	0.57	+0.3
1,430,494	+		Echvi_1244	0.58	-0.5
1,430,495	-		Echvi_1244	0.58	-0.3
1,430,495	-		Echvi_1244	0.58	-1.3
1,430,498	+		Echvi_1244	0.58	-1.1
1,430,499	-		Echvi_1244	0.58	-0.7
1,430,499	-		Echvi_1244	0.58	+1.1
1,430,525	+		Echvi_1244	0.59	+0.3
1,430,526	-		Echvi_1244	0.59	+0.1
1,430,526	-		Echvi_1244	0.59	-0.4
1,430,526	-		Echvi_1244	0.59	-1.1
1,430,526	-		Echvi_1244	0.59	+1.5
1,430,527	+		Echvi_1244	0.59	-0.7
1,430,527	+		Echvi_1244	0.59	-0.5
1,430,562	+		Echvi_1244	0.60	-0.4
1,430,562	+		Echvi_1244	0.60	-0.0
1,430,562	+		Echvi_1244	0.60	-1.1
1,430,563	-		Echvi_1244	0.60	-1.1
1,430,563	-		Echvi_1244	0.60	+1.0
1,430,563	-		Echvi_1244	0.60	+1.0
1,430,563	-		Echvi_1244	0.60	+0.0
1,430,597	+		Echvi_1244	0.60	-3.0
1,430,597	+		Echvi_1244	0.60	-0.3
1,430,598	-		Echvi_1244	0.60	-0.8
1,430,598	-		Echvi_1244	0.60	+0.2
1,430,621	-		Echvi_1244	0.61	-1.4
1,430,638	+		Echvi_1244	0.61	-0.2
1,430,744	+		Echvi_1244	0.64	-0.2
1,430,744	+		Echvi_1244	0.64	-1.1
1,430,744	+		Echvi_1244	0.64	-0.2
1,430,745	-		Echvi_1244	0.64	+0.4
1,430,746	+				+1.5
1,430,746	+		Echvi_1244	0.64	+0.7
1,430,747	-		Echvi_1244	0.64	+1.3
1,430,814	-		Echvi_1244	0.65	-0.4
1,430,817	+		Echvi_1244	0.65	+2.2
1,430,818	-		Echvi_1244	0.65	+1.2
1,430,818	-		Echvi_1244	0.65	-0.7
1,430,818	-		Echvi_1244	0.65	+0.8
1,430,837	+		Echvi_1244	0.66	-0.2
1,430,837	+		Echvi_1244	0.66	+2.5
1,430,888	+		Echvi_1244	0.67	+0.6
1,430,889	-		Echvi_1244	0.67	-1.4
1,430,889	-		Echvi_1244	0.67	-0.3
1,430,918	-		Echvi_1244	0.67	-0.5
1,430,952	+		Echvi_1244	0.68	-1.5
1,430,952	+		Echvi_1244	0.68	-1.7
1,430,953	-		Echvi_1244	0.68	+1.0
1,430,977	-		Echvi_1244	0.69	+0.1
1,430,977	-		Echvi_1244	0.69	-1.1
1,431,008	+		Echvi_1244	0.69	+0.8
1,431,008	+		Echvi_1244	0.69	-0.8
1,431,008	+		Echvi_1244	0.69	+2.0
1,431,008	+		Echvi_1244	0.69	-0.6
1,431,008	+		Echvi_1244	0.69	-0.1
1,431,009	-		Echvi_1244	0.69	+0.1
1,431,010	+		Echvi_1244	0.69	+1.4
1,431,010	+		Echvi_1244	0.69	+0.7
1,431,010	+		Echvi_1244	0.69	+0.6
1,431,011	-		Echvi_1244	0.70	-1.2
1,431,021	+		Echvi_1244	0.70	-0.9
1,431,035	+		Echvi_1244	0.70	-2.1
1,431,082	+		Echvi_1244	0.71	-1.7
1,431,082	+		Echvi_1244	0.71	-0.6
1,431,083	-		Echvi_1244	0.71	+1.0
1,431,083	-		Echvi_1244	0.71	-0.3
1,431,176	+		Echvi_1244	0.73	+0.2
1,431,177	-		Echvi_1244	0.73	-1.4
1,431,197	+		Echvi_1244	0.74	+0.4
1,431,198	-		Echvi_1244	0.74	-1.1
1,431,198	-		Echvi_1244	0.74	+0.6
1,431,266	-		Echvi_1244	0.75	-1.2
1,431,360	+		Echvi_1244	0.77	-0.1
1,431,361	-		Echvi_1244	0.77	-1.6
1,431,380	-		Echvi_1244	0.78	+0.8
1,431,380	-		Echvi_1244	0.78	+1.3
1,431,487	-		Echvi_1244	0.80	-0.7
1,431,587	-		Echvi_1244	0.82	+0.3
1,431,653	-		Echvi_1244	0.84	+1.5
1,431,681	-		Echvi_1244	0.84	-0.0
1,431,689	+		Echvi_1244	0.85	-1.8
1,431,689	+		Echvi_1244	0.85	-2.1
1,431,690	-		Echvi_1244	0.85	+1.1
1,431,755	+		Echvi_1244	0.86	-1.1
1,431,756	-		Echvi_1244	0.86	-0.9
1,431,757	+		Echvi_1244	0.86	-0.6
1,431,757	+		Echvi_1244	0.86	-0.8
1,431,757	+		Echvi_1244	0.86	-0.1
1,431,757	+		Echvi_1244	0.86	-1.0
1,431,757	+		Echvi_1244	0.86	-0.1
1,431,757	+		Echvi_1244	0.86	-2.1
1,431,757	+		Echvi_1244	0.86	-0.0
1,431,768	+		Echvi_1244	0.86	-0.1
1,431,768	+		Echvi_1244	0.86	-1.1
1,431,768	+		Echvi_1244	0.86	-0.6
1,431,769	-		Echvi_1244	0.86	+1.3
1,431,769	-		Echvi_1244	0.86	+1.3
1,431,769	-		Echvi_1244	0.86	-0.4
1,431,800	+		Echvi_1244	0.87	+0.2
1,431,876	-		Echvi_1244	0.89	-3.4
1,431,880	+		Echvi_1244	0.89	+0.3
1,431,880	+		Echvi_1244	0.89	-0.8
1,431,880	+		Echvi_1244	0.89	-0.8
1,431,880	+		Echvi_1244	0.89	-1.3
1,431,880	+		Echvi_1244	0.89	-1.4
1,431,881	-		Echvi_1244	0.89	-0.1
1,431,881	-		Echvi_1244	0.89	-0.9
1,431,881	-		Echvi_1244	0.89	-1.7
1,431,881	-		Echvi_1244	0.89	+0.3
1,431,881	-		Echvi_1244	0.89	+0.5
1,431,881	-		Echvi_1244	0.89	+0.5
1,431,881	-		Echvi_1244	0.89	-1.2
1,431,896	-		Echvi_1244	0.89	-0.2
1,431,921	+		Echvi_1244	0.90	+0.5
1,431,921	+		Echvi_1244	0.90	+0.2
1,431,922	-		Echvi_1244	0.90	-1.7
1,431,922	-		Echvi_1244	0.90	-0.2
1,431,922	-		Echvi_1244	0.90	-0.9
1,431,922	-		Echvi_1244	0.90	+0.7
1,431,922	-		Echvi_1244	0.90	+1.4
1,431,922	-		Echvi_1244	0.90	-0.7
1,431,935	+				+0.7
1,431,935	+				-0.2
1,431,935	+				-0.2
1,431,935	+				-2.1
1,431,936	-				-0.1
1,431,936	-				-1.5
1,431,936	-				-0.5
1,431,936	-				-1.1
1,431,936	-				-0.4
1,431,969	+				-0.7
1,431,969	+				+0.9
1,431,970	-				+1.4
1,431,970	-				-0.8
1,431,975	+				+0.4
1,431,975	+				+1.9
1,431,975	+				-0.5
1,431,976	-				-0.5
1,431,976	-				-0.4
1,432,083	-				-0.5
1,432,086	+				+3.5
1,432,086	+				+0.1
1,432,086	+				-0.4
1,432,087	-				+0.1
1,432,087	-				-0.4
1,432,119	+				+0.0
1,432,120	-				+1.5
1,432,120	-				-1.9
1,432,126	+				-0.2
1,432,126	+				-0.9
1,432,126	+				-0.8
1,432,127	-				+1.6
1,432,170	+				-3.0
1,432,170	+				-1.7
1,432,170	+				-2.7
1,432,170	+				-1.5
1,432,171	-				+0.3
1,432,171	-				+0.7
1,432,226	+				-0.9
1,432,226	+				-0.4
1,432,271	+				+0.2
1,432,271	+				-0.3
1,432,272	-				-0.8
1,432,272	-				+1.0
1,432,275	+				-1.2
1,432,276	-				+2.1
1,432,366	+				+0.4
1,432,367	-				-0.5
1,432,369	-				+0.9
1,432,369	-				-0.8
1,432,383	-				-0.5
1,432,397	-				+1.5
1,432,868	+				-1.1
1,432,868	+				-0.2
1,432,869	-				-1.0
1,432,873	-				+0.1
1,432,873	-				+1.2
1,432,873	-				+0.3
1,432,883	-				-0.4
1,432,883	-				-2.0
1,432,926	-				-0.5
1,432,926	-				-0.5
1,432,926	-				+1.1
1,432,926	-				-1.1
1,432,974	+				-1.1
1,433,019	-		Echvi_1246	0.11	+2.4
1,433,019	-		Echvi_1246	0.11	-1.9
1,433,256	+		Echvi_1246	0.29	-1.7
1,433,257	-		Echvi_1246	0.29	-0.2
1,433,267	+		Echvi_1246	0.29	-0.5
1,433,267	+		Echvi_1246	0.29	-1.1
1,433,267	+		Echvi_1246	0.29	-0.0
1,433,268	-		Echvi_1246	0.29	-2.2
1,433,268	-		Echvi_1246	0.29	-0.4
1,433,268	-		Echvi_1246	0.29	-1.4
1,433,319	-		Echvi_1246	0.33	-1.5