Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1213

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,388,737	-		Echvi_1212	0.25	+0.4
1,388,801	-		Echvi_1212	0.31	-0.0
1,388,818	+		Echvi_1212	0.32	-0.1
1,388,819	-		Echvi_1212	0.32	-0.8
1,388,819	-		Echvi_1212	0.32	+0.6
1,388,859	+		Echvi_1212	0.36	+0.3
1,388,859	+		Echvi_1212	0.36	-0.0
1,388,860	-		Echvi_1212	0.36	+1.2
1,388,891	-		Echvi_1212	0.39	+0.7
1,388,891	-		Echvi_1212	0.39	+1.8
1,388,991	-		Echvi_1212	0.47	-1.0
1,388,991	-		Echvi_1212	0.47	+0.0
1,389,039	-		Echvi_1212	0.52	-0.1
1,389,095	-		Echvi_1212	0.56	+0.4
1,389,095	-		Echvi_1212	0.56	+1.3
1,389,095	-		Echvi_1212	0.56	-0.0
1,389,095	-		Echvi_1212	0.56	-0.1
1,389,096	+		Echvi_1212	0.57	-1.6
1,389,097	-		Echvi_1212	0.57	+0.8
1,389,148	+		Echvi_1212	0.61	+0.1
1,389,176	+		Echvi_1212	0.64	+0.1
1,389,258	+		Echvi_1212	0.71	+0.0
1,389,263	-		Echvi_1212	0.71	-1.5
1,389,320	+		Echvi_1212	0.76	-0.5
1,389,381	+		Echvi_1212	0.82	+0.1
1,389,381	+		Echvi_1212	0.82	-0.1
1,389,382	-		Echvi_1212	0.82	-1.1
1,389,382	-		Echvi_1212	0.82	-0.4
1,389,382	-		Echvi_1212	0.82	+0.9
1,389,382	-		Echvi_1212	0.82	-1.2
1,389,382	-		Echvi_1212	0.82	+1.7
1,389,385	+		Echvi_1212	0.82	-0.5
1,389,385	+		Echvi_1212	0.82	-0.5
1,389,385	+		Echvi_1212	0.82	+0.5
1,389,385	+		Echvi_1212	0.82	+1.8
1,389,385	+		Echvi_1212	0.82	+0.2
1,389,386	-		Echvi_1212	0.82	+0.7
1,389,395	+		Echvi_1212	0.83	+0.4
1,389,395	+		Echvi_1212	0.83	+0.1
1,389,396	-		Echvi_1212	0.83	+1.0
1,389,396	-		Echvi_1212	0.83	+0.1
1,389,416	-		Echvi_1212	0.85	+3.0
1,389,416	-		Echvi_1212	0.85	+1.3
1,389,464	+		Echvi_1212	0.89	-0.1
1,389,579	+				-0.7
1,389,581	+				-0.6
1,389,603	+				-1.2
1,389,603	+				-2.4
1,389,604	-				-1.1
1,389,613	+				-0.2
1,389,614	-				-0.2
1,389,614	-				+0.3
1,389,618	+				+0.3
1,389,618	+				-1.5
1,389,619	-				+0.2
1,389,619	-				+0.9
1,389,625	-				-1.0
1,389,625	-				+1.6
1,389,626	+				+0.3
1,389,626	+				+0.1
1,389,627	-				+0.4
1,389,631	+				+0.4
1,389,641	+				-0.5
1,389,645	+				-0.7
1,389,645	+				-0.4
1,389,646	-				-1.1
1,389,646	-				+0.1
1,389,764	+				+0.1
1,389,765	-				-1.1
1,389,775	-				-0.5
1,389,883	+				-0.3
1,389,883	+				+0.8
1,389,982	+		Echvi_1213	0.12	-0.1
1,390,044	-		Echvi_1213	0.14	-1.2
1,390,090	+		Echvi_1213	0.16	-3.1
1,390,091	-		Echvi_1213	0.16	-0.7
1,390,091	-		Echvi_1213	0.16	-0.7
1,390,091	-		Echvi_1213	0.16	+0.6
1,390,167	-		Echvi_1213	0.20	+0.1
1,390,174	-		Echvi_1213	0.20	-0.9
1,390,223	+		Echvi_1213	0.22	-0.2
1,390,223	+		Echvi_1213	0.22	-0.3
1,390,223	+		Echvi_1213	0.22	+0.2
1,390,223	+		Echvi_1213	0.22	+0.3
1,390,224	-		Echvi_1213	0.22	-1.8
1,390,224	-		Echvi_1213	0.22	-2.6
1,390,224	-		Echvi_1213	0.22	+0.6
1,390,305	+		Echvi_1213	0.26	-1.6
1,390,305	+		Echvi_1213	0.26	+1.5
1,390,306	-		Echvi_1213	0.26	+1.2
1,390,476	+		Echvi_1213	0.33	-1.7
1,390,488	+		Echvi_1213	0.34	+0.2
1,390,488	+		Echvi_1213	0.34	-1.7
1,390,508	+		Echvi_1213	0.34	+0.3
1,390,508	+		Echvi_1213	0.34	-0.7
1,390,508	+		Echvi_1213	0.34	-0.7
1,390,509	-		Echvi_1213	0.34	-2.8
1,390,509	-		Echvi_1213	0.34	-1.1
1,390,509	-		Echvi_1213	0.34	-1.2
1,390,514	+		Echvi_1213	0.35	-1.1
1,390,523	+		Echvi_1213	0.35	-1.1
1,390,524	-		Echvi_1213	0.35	-0.3
1,390,661	+		Echvi_1213	0.41	-2.0
1,390,661	+		Echvi_1213	0.41	-2.0
1,390,662	-		Echvi_1213	0.41	-0.4
1,390,719	+		Echvi_1213	0.43	-1.1
1,390,719	+		Echvi_1213	0.43	-0.6
1,390,720	-		Echvi_1213	0.43	-0.4
1,390,720	-		Echvi_1213	0.43	+0.3
1,390,721	+		Echvi_1213	0.43	+0.7
1,390,721	+		Echvi_1213	0.43	-0.6
1,390,721	+		Echvi_1213	0.43	-0.8
1,390,727	-		Echvi_1213	0.44	+0.7
1,390,727	-		Echvi_1213	0.44	+0.0
1,390,727	-		Echvi_1213	0.44	-0.1
1,390,727	-		Echvi_1213	0.44	+0.3
1,390,766	+		Echvi_1213	0.45	+2.1
1,390,767	-		Echvi_1213	0.45	+0.5
1,390,767	-		Echvi_1213	0.45	-0.2
1,390,790	-		Echvi_1213	0.46	-1.7
1,390,839	+		Echvi_1213	0.49	-0.5
1,390,839	+		Echvi_1213	0.49	+0.3
1,390,839	+		Echvi_1213	0.49	+0.5
1,390,840	-		Echvi_1213	0.49	-0.7
1,390,971	+		Echvi_1213	0.54	-1.3
1,390,992	+		Echvi_1213	0.55	-1.0
1,391,002	+		Echvi_1213	0.56	+0.1
1,391,002	+		Echvi_1213	0.56	+0.2
1,391,028	+		Echvi_1213	0.57	-2.4
1,391,029	-		Echvi_1213	0.57	+1.3
1,391,029	-		Echvi_1213	0.57	+0.4
1,391,064	-		Echvi_1213	0.58	-0.3
1,391,064	-		Echvi_1213	0.58	+0.4
1,391,066	-		Echvi_1213	0.58	-1.5
1,391,066	-		Echvi_1213	0.58	-1.0
1,391,066	-		Echvi_1213	0.58	-0.4
1,391,075	+		Echvi_1213	0.59	-1.6
1,391,076	-		Echvi_1213	0.59	-1.1
1,391,123	-		Echvi_1213	0.61	-0.6
1,391,141	+		Echvi_1213	0.61	-1.1
1,391,277	+		Echvi_1213	0.67	-0.9
1,391,277	+		Echvi_1213	0.67	+1.5
1,391,282	+		Echvi_1213	0.68	-2.0
1,391,282	+		Echvi_1213	0.68	+0.3
1,391,283	-		Echvi_1213	0.68	+0.4
1,391,313	+		Echvi_1213	0.69	+1.8
1,391,336	-		Echvi_1213	0.70	+0.0
1,391,349	+		Echvi_1213	0.70	-1.0
1,391,350	-		Echvi_1213	0.70	-0.7
1,391,452	+		Echvi_1213	0.75	-1.2
1,391,452	+		Echvi_1213	0.75	-0.4
1,391,490	-		Echvi_1213	0.76	+0.4
1,391,530	+		Echvi_1213	0.78	-0.1
1,391,531	-		Echvi_1213	0.78	-0.5
1,391,531	-		Echvi_1213	0.78	+0.4
1,391,531	-		Echvi_1213	0.78	+0.4
1,391,554	-		Echvi_1213	0.79	-0.2
1,391,657	+		Echvi_1213	0.84	-1.0
1,391,773	+		Echvi_1213	0.89	+2.1
1,391,774	-		Echvi_1213	0.89	+0.6
1,391,774	-		Echvi_1213	0.89	+1.1
1,391,774	-		Echvi_1213	0.89	+2.5
1,391,777	+		Echvi_1213	0.89	-0.8
1,391,777	+		Echvi_1213	0.89	-1.1
1,391,777	+		Echvi_1213	0.89	-2.4
1,391,777	+		Echvi_1213	0.89	-0.6
1,391,777	+		Echvi_1213	0.89	-0.2
1,391,778	-		Echvi_1213	0.89	-0.2
1,391,778	-		Echvi_1213	0.89	-2.3
1,391,778	-		Echvi_1213	0.89	-0.7
1,391,806	-				-1.0
1,391,806	-				+1.1
1,391,834	+				-0.1
1,391,835	-				-1.3
1,391,835	-				-1.5
1,391,932	+				-0.1
1,391,933	-				-0.5
1,391,933	-				+0.8
1,391,935	+				-1.1
1,391,936	-				+0.9
1,391,937	+				-0.0
1,391,951	-				+0.4
1,391,951	-				-0.7
1,391,954	-				-0.1
1,391,954	-				-0.0
1,391,975	+				+0.7
1,391,975	+				-0.1
1,392,027	+				-1.8
1,392,040	+				+0.3
1,392,047	-				+0.1
1,392,050	+				-0.1
1,392,053	-				-0.1
1,392,086	+				-0.3