Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1150

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,317,125	+				+0.6
1,317,126	-				-1.1
1,317,126	-				+0.2
1,317,215	-				-0.0
1,317,215	-				-0.6
1,317,325	+		Echvi_1149	0.18	+0.2
1,317,325	+		Echvi_1149	0.18	-0.5
1,317,326	-		Echvi_1149	0.18	-0.7
1,317,475	+		Echvi_1149	0.33	-0.4
1,317,515	+		Echvi_1149	0.38	-0.2
1,317,516	-		Echvi_1149	0.38	+0.5
1,317,531	+		Echvi_1149	0.39	-0.3
1,317,531	+		Echvi_1149	0.39	-0.4
1,317,555	+		Echvi_1149	0.42	-0.4
1,317,555	+		Echvi_1149	0.42	-0.2
1,317,556	-		Echvi_1149	0.42	+0.6
1,317,556	-		Echvi_1149	0.42	+1.5
1,317,556	-		Echvi_1149	0.42	+2.2
1,317,556	-		Echvi_1149	0.42	+0.7
1,317,556	-		Echvi_1149	0.42	+0.6
1,317,556	-		Echvi_1149	0.42	-0.0
1,317,624	-		Echvi_1149	0.49	-0.4
1,317,645	-		Echvi_1149	0.51	-1.3
1,317,645	-		Echvi_1149	0.51	-0.1
1,317,676	-		Echvi_1149	0.54	-0.7
1,317,691	-		Echvi_1149	0.56	-1.0
1,317,697	+		Echvi_1149	0.56	-0.9
1,317,721	+		Echvi_1149	0.59	+0.9
1,317,722	-		Echvi_1149	0.59	+0.2
1,317,786	-		Echvi_1149	0.66	-0.0
1,317,786	-		Echvi_1149	0.66	-0.4
1,317,786	-		Echvi_1149	0.66	-1.4
1,317,786	-		Echvi_1149	0.66	-0.7
1,317,843	+		Echvi_1149	0.72	-0.8
1,317,843	+		Echvi_1149	0.72	+0.2
1,317,843	+		Echvi_1149	0.72	+0.8
1,317,843	+		Echvi_1149	0.72	+1.2
1,317,843	+		Echvi_1149	0.72	+0.5
1,317,843	+		Echvi_1149	0.72	+0.2
1,317,949	-		Echvi_1149	0.83	+2.4
1,317,958	+		Echvi_1149	0.84	-0.5
1,317,958	+		Echvi_1149	0.84	-0.8
1,317,959	-		Echvi_1149	0.84	-0.5
1,318,010	-		Echvi_1149	0.89	+0.3
1,318,010	-		Echvi_1149	0.89	-0.1
1,318,071	+				-0.1
1,318,072	-				+1.5
1,318,115	-				-0.3
1,318,118	-				-0.8
1,318,154	+				+0.2
1,318,154	+				-0.1
1,318,154	+				+2.2
1,318,154	+				+0.6
1,318,154	+				-0.0
1,318,154	+				+0.7
1,318,155	-				-1.2
1,318,155	-				-0.6
1,318,193	+		Echvi_1150	0.11	-0.8
1,318,193	+		Echvi_1150	0.11	-1.6
1,318,246	+		Echvi_1150	0.18	-0.1
1,318,246	+		Echvi_1150	0.18	-0.7
1,318,247	-		Echvi_1150	0.19	-1.0
1,318,283	+		Echvi_1150	0.23	-0.7
1,318,367	+		Echvi_1150	0.35	-1.0
1,318,373	+		Echvi_1150	0.36	+0.3
1,318,403	+		Echvi_1150	0.40	-0.5
1,318,403	+		Echvi_1150	0.40	-0.8
1,318,403	+		Echvi_1150	0.40	-1.4
1,318,404	-		Echvi_1150	0.40	-0.1
1,318,404	-		Echvi_1150	0.40	-0.3
1,318,404	-		Echvi_1150	0.40	-0.4
1,318,404	-		Echvi_1150	0.40	-0.4
1,318,438	+		Echvi_1150	0.44	+0.2
1,318,439	-		Echvi_1150	0.45	-1.1
1,318,439	-		Echvi_1150	0.45	-0.7
1,318,444	-		Echvi_1150	0.45	-0.6
1,318,458	+		Echvi_1150	0.47	+0.0
1,318,458	+		Echvi_1150	0.47	-0.9
1,318,459	-		Echvi_1150	0.47	-0.3
1,318,474	+		Echvi_1150	0.49	-1.1
1,318,479	+		Echvi_1150	0.50	-0.8
1,318,479	+		Echvi_1150	0.50	-0.4
1,318,480	-		Echvi_1150	0.50	+0.4
1,318,480	-		Echvi_1150	0.50	+1.5
1,318,480	-		Echvi_1150	0.50	-0.5
1,318,480	-		Echvi_1150	0.50	-2.1
1,318,481	+		Echvi_1150	0.50	+1.5
1,318,481	+		Echvi_1150	0.50	+0.5
1,318,481	+		Echvi_1150	0.50	+1.1
1,318,481	+		Echvi_1150	0.50	-1.5
1,318,482	-		Echvi_1150	0.50	-1.3
1,318,482	-		Echvi_1150	0.50	+0.7
1,318,482	-		Echvi_1150	0.50	-1.4
1,318,482	-		Echvi_1150	0.50	-1.4
1,318,482	-		Echvi_1150	0.50	-2.2
1,318,482	-		Echvi_1150	0.50	-0.1
1,318,547	+		Echvi_1150	0.59	-0.7
1,318,548	-		Echvi_1150	0.59	+0.0
1,318,606	+		Echvi_1150	0.67	-2.6
1,318,611	+		Echvi_1150	0.68	+0.8
1,318,611	+		Echvi_1150	0.68	+0.3
1,318,611	+		Echvi_1150	0.68	+1.2
1,318,612	-		Echvi_1150	0.68	+0.5
1,318,613	+		Echvi_1150	0.68	-0.3
1,318,614	-		Echvi_1150	0.68	-1.3
1,318,680	+		Echvi_1150	0.77	-3.2
1,318,857	+				-0.0
1,318,857	+				+0.6
1,318,858	-				-0.8
1,318,893	-				+0.6
1,319,410	-				+1.8
1,319,422	-				-0.5
1,319,422	-				+1.1
1,319,461	-				-1.3
1,319,527	+				+0.3
1,319,527	+				+1.6
1,319,528	-				-0.7
1,319,538	-				-0.6
1,319,542	+				-0.7
1,319,543	-				+0.9
1,319,543	-				+0.0
1,319,546	+				-0.8
1,319,546	+				-2.7
1,319,546	+				+1.7
1,319,546	+				-2.6
1,319,546	+				-1.1
1,319,547	-				+0.1
1,319,547	-				-0.2
1,319,547	-				-0.2
1,319,555	+				-1.4
1,319,555	+				+0.9
1,319,559	+				+1.6
1,319,561	+				+1.0
1,319,591	-				-1.1
1,319,591	-				-0.1
1,319,596	+				-0.5
1,319,651	+				+0.2
1,319,676	+				+0.1
1,319,680	+				+0.1
1,319,680	+				+1.7
1,319,706	+				+0.2