Experiment: m.b. Nalidixic 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0847 and Echvi_0848 are separated by 251 nucleotides Echvi_0848 and Echvi_0849 are separated by 3 nucleotides Echvi_0849 and Echvi_0850 overlap by 1 nucleotides Echvi_0850 and Echvi_0851 are separated by 12 nucleotides
Echvi_0847: Echvi_0847 - Predicted dinucleotide-binding enzymes, at 970,296 to 970,910
_0847
Echvi_0848: Echvi_0848 - Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family, at 971,162 to 971,950
_0848
Echvi_0849: Echvi_0849 - probable S-adenosylmethionine-dependent methyltransferase, YraL family, at 971,954 to 972,640
_0849
Echvi_0850: Echvi_0850 - Pterin-4a-carbinolamine dehydratase, at 972,640 to 972,870
_0850
Echvi_0851: Echvi_0851 - Uncharacterized conserved protein, at 972,883 to 973,152
_0851
Position (kb) 971
972 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 970.180 kb on - strand at 970.198 kb on + strand at 970.199 kb on - strand at 970.200 kb on + strand at 970.200 kb on + strand at 970.200 kb on + strand at 970.201 kb on - strand at 970.321 kb on + strand at 970.321 kb on + strand at 970.369 kb on + strand, within Echvi_0847 at 970.369 kb on + strand, within Echvi_0847 at 970.380 kb on + strand, within Echvi_0847 at 970.545 kb on - strand, within Echvi_0847 at 970.555 kb on - strand, within Echvi_0847 at 970.558 kb on - strand, within Echvi_0847 at 970.565 kb on + strand, within Echvi_0847 at 970.565 kb on + strand, within Echvi_0847 at 970.566 kb on - strand, within Echvi_0847 at 970.588 kb on + strand, within Echvi_0847 at 970.588 kb on + strand, within Echvi_0847 at 970.599 kb on - strand, within Echvi_0847 at 970.616 kb on + strand, within Echvi_0847 at 970.618 kb on + strand, within Echvi_0847 at 970.618 kb on + strand, within Echvi_0847 at 970.619 kb on - strand, within Echvi_0847 at 970.641 kb on + strand, within Echvi_0847 at 970.641 kb on + strand, within Echvi_0847 at 970.645 kb on - strand, within Echvi_0847 at 970.649 kb on + strand, within Echvi_0847 at 970.649 kb on + strand, within Echvi_0847 at 970.649 kb on + strand, within Echvi_0847 at 970.649 kb on + strand, within Echvi_0847 at 970.679 kb on + strand, within Echvi_0847 at 970.679 kb on + strand, within Echvi_0847 at 970.683 kb on + strand, within Echvi_0847 at 970.684 kb on - strand, within Echvi_0847 at 970.684 kb on - strand, within Echvi_0847 at 970.684 kb on - strand, within Echvi_0847 at 970.718 kb on + strand, within Echvi_0847 at 970.759 kb on - strand, within Echvi_0847 at 970.759 kb on - strand, within Echvi_0847 at 970.763 kb on + strand, within Echvi_0847 at 970.764 kb on - strand, within Echvi_0847 at 970.795 kb on - strand, within Echvi_0847 at 970.795 kb on - strand, within Echvi_0847 at 970.795 kb on - strand, within Echvi_0847 at 970.821 kb on + strand, within Echvi_0847 at 970.839 kb on + strand, within Echvi_0847 at 970.854 kb on - strand at 970.854 kb on - strand at 970.855 kb on + strand at 970.855 kb on + strand at 970.855 kb on + strand at 970.856 kb on - strand at 970.856 kb on - strand at 970.902 kb on + strand at 970.915 kb on - strand at 970.925 kb on + strand at 970.926 kb on - strand at 970.930 kb on + strand at 971.057 kb on + strand at 971.057 kb on + strand at 971.057 kb on + strand at 971.078 kb on + strand at 971.148 kb on - strand at 971.149 kb on + strand at 971.150 kb on - strand at 971.241 kb on + strand, within Echvi_0848 at 971.316 kb on + strand, within Echvi_0848 at 971.316 kb on + strand, within Echvi_0848 at 971.316 kb on + strand, within Echvi_0848 at 971.367 kb on + strand, within Echvi_0848 at 971.368 kb on - strand, within Echvi_0848 at 971.441 kb on + strand, within Echvi_0848 at 971.441 kb on + strand, within Echvi_0848 at 971.441 kb on + strand, within Echvi_0848 at 971.445 kb on + strand, within Echvi_0848 at 971.446 kb on - strand, within Echvi_0848 at 971.472 kb on + strand, within Echvi_0848 at 971.493 kb on - strand, within Echvi_0848 at 971.493 kb on - strand, within Echvi_0848 at 971.523 kb on - strand, within Echvi_0848 at 971.543 kb on - strand, within Echvi_0848 at 971.543 kb on - strand, within Echvi_0848 at 971.584 kb on + strand, within Echvi_0848 at 971.584 kb on + strand, within Echvi_0848 at 971.587 kb on + strand, within Echvi_0848 at 971.588 kb on - strand, within Echvi_0848 at 971.598 kb on + strand, within Echvi_0848 at 971.599 kb on - strand, within Echvi_0848 at 971.599 kb on - strand, within Echvi_0848 at 971.699 kb on + strand, within Echvi_0848 at 971.700 kb on - strand, within Echvi_0848 at 971.700 kb on - strand, within Echvi_0848 at 971.710 kb on + strand, within Echvi_0848 at 971.710 kb on + strand, within Echvi_0848 at 971.710 kb on + strand, within Echvi_0848 at 971.712 kb on + strand, within Echvi_0848 at 971.712 kb on + strand, within Echvi_0848 at 971.752 kb on + strand, within Echvi_0848 at 971.821 kb on - strand, within Echvi_0848 at 971.821 kb on - strand, within Echvi_0848 at 971.821 kb on - strand, within Echvi_0848 at 971.821 kb on - strand, within Echvi_0848 at 971.852 kb on + strand, within Echvi_0848 at 971.857 kb on + strand, within Echvi_0848 at 971.931 kb on - strand at 971.956 kb on - strand at 971.975 kb on - strand at 971.979 kb on - strand at 971.998 kb on + strand at 971.999 kb on - strand at 971.999 kb on - strand at 972.007 kb on + strand at 972.008 kb on - strand at 972.009 kb on + strand at 972.009 kb on + strand at 972.009 kb on + strand at 972.009 kb on + strand at 972.012 kb on + strand at 972.012 kb on + strand at 972.054 kb on + strand, within Echvi_0849 at 972.338 kb on + strand, within Echvi_0849 at 972.344 kb on + strand, within Echvi_0849 at 972.434 kb on + strand, within Echvi_0849 at 972.457 kb on + strand, within Echvi_0849 at 972.457 kb on + strand, within Echvi_0849 at 972.462 kb on + strand, within Echvi_0849 at 972.463 kb on - strand, within Echvi_0849 at 972.560 kb on + strand, within Echvi_0849 at 972.560 kb on + strand, within Echvi_0849 at 972.574 kb on + strand at 972.577 kb on + strand at 972.641 kb on + strand at 972.641 kb on + strand at 972.642 kb on - strand at 972.642 kb on - strand at 972.693 kb on + strand, within Echvi_0850 at 972.835 kb on + strand, within Echvi_0850 at 972.843 kb on + strand, within Echvi_0850 at 972.844 kb on - strand, within Echvi_0850 at 972.844 kb on - strand, within Echvi_0850 at 972.923 kb on + strand, within Echvi_0851 at 972.924 kb on - strand, within Echvi_0851 at 972.925 kb on + strand, within Echvi_0851 at 972.925 kb on + strand, within Echvi_0851 at 972.926 kb on - strand, within Echvi_0851 at 972.926 kb on - strand, within Echvi_0851
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.008 mg/ml remove 970,180 - -1.5 970,198 + -0.5 970,199 - +0.5 970,200 + -0.5 970,200 + +0.1 970,200 + +0.4 970,201 - +1.1 970,321 + +0.8 970,321 + -0.5 970,369 + Echvi_0847 0.12 -0.3 970,369 + Echvi_0847 0.12 -0.6 970,380 + Echvi_0847 0.14 -1.8 970,545 - Echvi_0847 0.40 +0.3 970,555 - Echvi_0847 0.42 +0.5 970,558 - Echvi_0847 0.43 -0.8 970,565 + Echvi_0847 0.44 +3.9 970,565 + Echvi_0847 0.44 -0.0 970,566 - Echvi_0847 0.44 +0.7 970,588 + Echvi_0847 0.47 -1.6 970,588 + Echvi_0847 0.47 -1.4 970,599 - Echvi_0847 0.49 -0.3 970,616 + Echvi_0847 0.52 +0.4 970,618 + Echvi_0847 0.52 +0.0 970,618 + Echvi_0847 0.52 +0.0 970,619 - Echvi_0847 0.53 +1.2 970,641 + Echvi_0847 0.56 -1.1 970,641 + Echvi_0847 0.56 +0.1 970,645 - Echvi_0847 0.57 -1.8 970,649 + Echvi_0847 0.57 +0.8 970,649 + Echvi_0847 0.57 +0.1 970,649 + Echvi_0847 0.57 -1.6 970,649 + Echvi_0847 0.57 -1.8 970,679 + Echvi_0847 0.62 +1.3 970,679 + Echvi_0847 0.62 +0.9 970,683 + Echvi_0847 0.63 -1.7 970,684 - Echvi_0847 0.63 -0.2 970,684 - Echvi_0847 0.63 -1.5 970,684 - Echvi_0847 0.63 -2.2 970,718 + Echvi_0847 0.69 +0.3 970,759 - Echvi_0847 0.75 -0.0 970,759 - Echvi_0847 0.75 +0.7 970,763 + Echvi_0847 0.76 -0.9 970,764 - Echvi_0847 0.76 -0.6 970,795 - Echvi_0847 0.81 +0.5 970,795 - Echvi_0847 0.81 +0.7 970,795 - Echvi_0847 0.81 +0.2 970,821 + Echvi_0847 0.85 -0.6 970,839 + Echvi_0847 0.88 +0.4 970,854 - +1.4 970,854 - +1.9 970,855 + +0.2 970,855 + -2.2 970,855 + +0.1 970,856 - -0.7 970,856 - -0.5 970,902 + +0.7 970,915 - +2.0 970,925 + -0.7 970,926 - +1.8 970,930 + -1.6 971,057 + +1.0 971,057 + +0.2 971,057 + +1.2 971,078 + -1.0 971,148 - -1.0 971,149 + -0.4 971,150 - +0.5 971,241 + Echvi_0848 0.10 -0.0 971,316 + Echvi_0848 0.20 -0.1 971,316 + Echvi_0848 0.20 +1.2 971,316 + Echvi_0848 0.20 -0.0 971,367 + Echvi_0848 0.26 +0.7 971,368 - Echvi_0848 0.26 -0.8 971,441 + Echvi_0848 0.35 +2.5 971,441 + Echvi_0848 0.35 +1.5 971,441 + Echvi_0848 0.35 +0.8 971,445 + Echvi_0848 0.36 -0.3 971,446 - Echvi_0848 0.36 -1.1 971,472 + Echvi_0848 0.39 +0.7 971,493 - Echvi_0848 0.42 +0.1 971,493 - Echvi_0848 0.42 -0.7 971,523 - Echvi_0848 0.46 +1.2 971,543 - Echvi_0848 0.48 -2.4 971,543 - Echvi_0848 0.48 -2.0 971,584 + Echvi_0848 0.53 -2.1 971,584 + Echvi_0848 0.53 -0.1 971,587 + Echvi_0848 0.54 +0.1 971,588 - Echvi_0848 0.54 +1.4 971,598 + Echvi_0848 0.55 -1.8 971,599 - Echvi_0848 0.55 +1.5 971,599 - Echvi_0848 0.55 -0.0 971,699 + Echvi_0848 0.68 -0.8 971,700 - Echvi_0848 0.68 +0.5 971,700 - Echvi_0848 0.68 +0.9 971,710 + Echvi_0848 0.69 -1.2 971,710 + Echvi_0848 0.69 +1.0 971,710 + Echvi_0848 0.69 +1.1 971,712 + Echvi_0848 0.70 +1.5 971,712 + Echvi_0848 0.70 -0.1 971,752 + Echvi_0848 0.75 -0.8 971,821 - Echvi_0848 0.84 +0.6 971,821 - Echvi_0848 0.84 -0.7 971,821 - Echvi_0848 0.84 +0.4 971,821 - Echvi_0848 0.84 -0.0 971,852 + Echvi_0848 0.87 +2.4 971,857 + Echvi_0848 0.88 +0.7 971,931 - +0.7 971,956 - -0.8 971,975 - +0.7 971,979 - +0.4 971,998 + +0.8 971,999 - +1.0 971,999 - +0.8 972,007 + +3.3 972,008 - -1.8 972,009 + +1.5 972,009 + -0.2 972,009 + +0.1 972,009 + +0.4 972,012 + -0.2 972,012 + +1.7 972,054 + Echvi_0849 0.15 -0.6 972,338 + Echvi_0849 0.56 +1.1 972,344 + Echvi_0849 0.57 -0.3 972,434 + Echvi_0849 0.70 +0.6 972,457 + Echvi_0849 0.73 +1.2 972,457 + Echvi_0849 0.73 +2.3 972,462 + Echvi_0849 0.74 +0.1 972,463 - Echvi_0849 0.74 +1.4 972,560 + Echvi_0849 0.88 +0.4 972,560 + Echvi_0849 0.88 -0.5 972,574 + -0.1 972,577 + -1.0 972,641 + +0.4 972,641 + +0.9 972,642 - +0.6 972,642 - +0.8 972,693 + Echvi_0850 0.23 +1.4 972,835 + Echvi_0850 0.84 +1.9 972,843 + Echvi_0850 0.88 +0.5 972,844 - Echvi_0850 0.88 +1.4 972,844 - Echvi_0850 0.88 +3.9 972,923 + Echvi_0851 0.15 +0.1 972,924 - Echvi_0851 0.15 +2.2 972,925 + Echvi_0851 0.16 +1.3 972,925 + Echvi_0851 0.16 +0.9 972,926 - Echvi_0851 0.16 +0.4 972,926 - Echvi_0851 0.16 +0.5
Or see this region's nucleotide sequence