Experiment: m.b. Nalidixic 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0369 and Echvi_0370 are separated by 82 nucleotides Echvi_0370 and Echvi_0371 are separated by 47 nucleotides Echvi_0371 and Echvi_0372 are separated by 166 nucleotides
Echvi_0369: Echvi_0369 - ATPases with chaperone activity, ATP-binding subunit, at 396,212 to 398,740
_0369
Echvi_0370: Echvi_0370 - WbqC-like protein family., at 398,823 to 399,452
_0370
Echvi_0371: Echvi_0371 - Sua5/YciO/YrdC/YwlC family protein, at 399,500 to 400,129
_0371
Echvi_0372: Echvi_0372 - conserved hypothetical protein, YceG family, at 400,296 to 401,339
_0372
Position (kb) 399
400
401 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 398.936 kb on - strand, within Echvi_0370 at 398.936 kb on - strand, within Echvi_0370 at 398.954 kb on + strand, within Echvi_0370 at 399.016 kb on + strand, within Echvi_0370 at 399.247 kb on + strand, within Echvi_0370 at 399.270 kb on + strand, within Echvi_0370 at 399.312 kb on + strand, within Echvi_0370 at 399.326 kb on + strand, within Echvi_0370 at 399.331 kb on + strand, within Echvi_0370 at 399.368 kb on + strand, within Echvi_0370 at 399.388 kb on - strand, within Echvi_0370 at 399.405 kb on + strand at 399.479 kb on + strand at 399.489 kb on + strand at 399.489 kb on + strand at 399.559 kb on + strand at 399.586 kb on + strand, within Echvi_0371 at 399.586 kb on + strand, within Echvi_0371 at 399.663 kb on + strand, within Echvi_0371 at 399.663 kb on + strand, within Echvi_0371 at 399.731 kb on + strand, within Echvi_0371 at 399.734 kb on - strand, within Echvi_0371 at 399.734 kb on - strand, within Echvi_0371 at 399.743 kb on - strand, within Echvi_0371 at 399.743 kb on - strand, within Echvi_0371 at 399.745 kb on + strand, within Echvi_0371 at 399.746 kb on - strand, within Echvi_0371 at 399.791 kb on + strand, within Echvi_0371 at 399.823 kb on + strand, within Echvi_0371 at 399.889 kb on + strand, within Echvi_0371 at 399.890 kb on - strand, within Echvi_0371 at 399.891 kb on + strand, within Echvi_0371 at 399.900 kb on - strand, within Echvi_0371 at 399.902 kb on - strand, within Echvi_0371 at 399.902 kb on - strand, within Echvi_0371 at 399.915 kb on + strand, within Echvi_0371 at 399.950 kb on + strand, within Echvi_0371 at 399.997 kb on + strand, within Echvi_0371 at 399.997 kb on + strand, within Echvi_0371 at 399.997 kb on + strand, within Echvi_0371 at 400.033 kb on - strand, within Echvi_0371 at 400.059 kb on - strand, within Echvi_0371 at 400.077 kb on - strand at 400.156 kb on + strand at 400.156 kb on + strand at 400.156 kb on + strand at 400.156 kb on + strand at 400.156 kb on + strand at 400.156 kb on + strand at 400.157 kb on - strand at 400.157 kb on - strand at 400.157 kb on - strand at 400.157 kb on - strand at 400.157 kb on - strand at 400.169 kb on - strand at 400.191 kb on + strand at 400.228 kb on + strand at 400.228 kb on + strand at 400.228 kb on + strand at 400.232 kb on + strand at 400.232 kb on + strand at 400.232 kb on + strand at 400.233 kb on - strand at 400.291 kb on + strand at 400.819 kb on - strand, within Echvi_0372 at 400.829 kb on + strand, within Echvi_0372 at 400.857 kb on + strand at 401.004 kb on + strand, within Echvi_0372 at 401.025 kb on - strand, within Echvi_0372 at 401.121 kb on + strand, within Echvi_0372
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.008 mg/ml remove 398,936 - Echvi_0370 0.18 -0.4 398,936 - Echvi_0370 0.18 +0.9 398,954 + Echvi_0370 0.21 +2.0 399,016 + Echvi_0370 0.31 +0.9 399,247 + Echvi_0370 0.67 -0.1 399,270 + Echvi_0370 0.71 +0.2 399,312 + Echvi_0370 0.78 -0.5 399,326 + Echvi_0370 0.80 -1.3 399,331 + Echvi_0370 0.81 +0.3 399,368 + Echvi_0370 0.87 +1.1 399,388 - Echvi_0370 0.90 +1.4 399,405 + +0.7 399,479 + -0.8 399,489 + -0.5 399,489 + +2.2 399,559 + +0.2 399,586 + Echvi_0371 0.14 -3.0 399,586 + Echvi_0371 0.14 +1.1 399,663 + Echvi_0371 0.26 -0.5 399,663 + Echvi_0371 0.26 -0.8 399,731 + Echvi_0371 0.37 -1.0 399,734 - Echvi_0371 0.37 +1.7 399,734 - Echvi_0371 0.37 +0.7 399,743 - Echvi_0371 0.39 -0.5 399,743 - Echvi_0371 0.39 +0.9 399,745 + Echvi_0371 0.39 +0.7 399,746 - Echvi_0371 0.39 +0.0 399,791 + Echvi_0371 0.46 -0.4 399,823 + Echvi_0371 0.51 +1.7 399,889 + Echvi_0371 0.62 +0.8 399,890 - Echvi_0371 0.62 +1.2 399,891 + Echvi_0371 0.62 +0.6 399,900 - Echvi_0371 0.63 +1.5 399,902 - Echvi_0371 0.64 +0.0 399,902 - Echvi_0371 0.64 +1.4 399,915 + Echvi_0371 0.66 -0.5 399,950 + Echvi_0371 0.71 +0.1 399,997 + Echvi_0371 0.79 +0.5 399,997 + Echvi_0371 0.79 -0.3 399,997 + Echvi_0371 0.79 +2.7 400,033 - Echvi_0371 0.85 +1.4 400,059 - Echvi_0371 0.89 -0.2 400,077 - -0.6 400,156 + -1.1 400,156 + +0.7 400,156 + +0.7 400,156 + +1.1 400,156 + +1.2 400,156 + +0.1 400,157 - -0.9 400,157 - +0.8 400,157 - +1.3 400,157 - -0.1 400,157 - +0.8 400,169 - -0.4 400,191 + +2.0 400,228 + +0.5 400,228 + +1.1 400,228 + -1.6 400,232 + -0.3 400,232 + +0.1 400,232 + -1.0 400,233 - +1.0 400,291 + -1.4 400,819 - Echvi_0372 0.50 +5.4 400,829 + Echvi_0372 0.51 +3.2 400,857 + +3.4 401,004 + Echvi_0372 0.68 +0.7 401,025 - Echvi_0372 0.70 +3.7 401,121 + Echvi_0372 0.79 -0.1
Or see this region's nucleotide sequence