Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0082

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
81,836	+		Echvi_0080	0.80	-1.3
81,836	+		Echvi_0080	0.80	-0.0
81,837	-		Echvi_0080	0.80	-2.7
81,876	-		Echvi_0080	0.84	-1.3
81,909	+		Echvi_0080	0.87	-0.4
81,952	+				+0.7
81,952	+				-3.3
81,953	-				-0.7
81,979	+				-0.6
81,979	+				-2.1
81,979	+				-1.7
81,979	+				-0.7
81,980	-				-1.2
81,980	-				-1.4
81,980	-				-0.7
81,980	-				-0.3
81,980	-				-1.7
81,980	-				-0.8
81,980	-				-0.9
81,980	-				-2.2
82,023	-				-2.9
82,026	+				+0.1
82,088	-				+0.4
82,114	+				-0.3
82,114	+				-1.3
82,114	+				-2.5
82,114	+				-1.4
82,145	+		Echvi_0081	0.13	+0.3
82,146	-		Echvi_0081	0.13	-0.2
82,156	+		Echvi_0081	0.14	-0.7
82,156	+		Echvi_0081	0.14	-1.7
82,159	-		Echvi_0081	0.15	-0.1
82,203	+		Echvi_0081	0.20	-0.1
82,203	+		Echvi_0081	0.20	-1.8
82,226	+		Echvi_0081	0.23	-0.8
82,226	+		Echvi_0081	0.23	-0.1
82,282	+		Echvi_0081	0.30	+0.7
82,295	+		Echvi_0081	0.32	+0.2
82,295	+		Echvi_0081	0.32	+0.8
82,526	+		Echvi_0081	0.62	-0.6
82,526	+				+1.2
82,527	-		Echvi_0081	0.62	-0.1
82,590	+		Echvi_0081	0.70	+1.7
82,590	+		Echvi_0081	0.70	-0.5
82,590	+		Echvi_0081	0.70	-1.3
82,647	-		Echvi_0081	0.77	-3.3
82,707	-		Echvi_0081	0.85	-0.0
82,720	-		Echvi_0081	0.87	+0.7
82,791	+				-0.2
82,792	-				-0.5
82,792	-				-0.9
82,793	+				+2.2
82,793	+				-1.9
82,794	-				-0.1
82,794	-				+0.7
82,795	+				-1.9
82,795	+				-0.7
82,795	+				+0.7
82,796	-				-1.3
82,814	-				+1.1
82,826	+				-0.8
82,826	+				+0.9
82,826	+				-1.3
82,826	+				+1.9
82,827	-				+0.9
82,827	-				-0.5
82,868	+				+1.0
82,874	-				-0.3
82,894	+				+1.1
82,894	+				-0.4
83,025	+		Echvi_0082	0.18	+1.5
83,038	+		Echvi_0082	0.20	+0.1
83,149	+		Echvi_0082	0.30	-1.3
83,253	+		Echvi_0082	0.39	+0.4
83,316	+		Echvi_0082	0.45	+0.2
83,317	-		Echvi_0082	0.45	+0.5
83,348	-		Echvi_0082	0.48	+1.1
83,348	-		Echvi_0082	0.48	+0.8
83,348	-		Echvi_0082	0.48	+0.7
83,379	+		Echvi_0082	0.50	-0.6
83,379	+		Echvi_0082	0.50	+0.5
83,379	+		Echvi_0082	0.50	-1.3
83,379	+		Echvi_0082	0.50	+0.3
83,380	-		Echvi_0082	0.51	-0.2
83,444	-		Echvi_0082	0.56	+0.9
83,467	-		Echvi_0082	0.58	+1.5
83,467	-		Echvi_0082	0.58	+1.2
83,467	-		Echvi_0082	0.58	+1.0
83,467	-		Echvi_0082	0.58	+1.3
83,468	+		Echvi_0082	0.59	-0.5
83,597	+		Echvi_0082	0.70	-0.3
83,597	+		Echvi_0082	0.70	-2.1
83,698	+		Echvi_0082	0.79	-1.5
83,699	-		Echvi_0082	0.79	+2.7
83,699	-		Echvi_0082	0.79	-0.9
83,721	-		Echvi_0082	0.81	-0.2
83,765	-		Echvi_0082	0.85	+1.7
83,785	+		Echvi_0082	0.87	+1.1
83,861	+				-0.9
83,918	-				+1.3
83,925	+				-0.7
83,926	-				+1.0
83,926	-				+0.1
83,992	-		Echvi_0083	0.11	-0.8
84,025	-		Echvi_0083	0.16	+1.6
84,095	-		Echvi_0083	0.28	-0.5
84,175	+		Echvi_0083	0.40	+0.7
84,199	+		Echvi_0083	0.44	-0.3
84,230	+		Echvi_0083	0.49	+1.1
84,230	+		Echvi_0083	0.49	+0.4
84,292	+		Echvi_0083	0.59	-1.0
84,293	-		Echvi_0083	0.59	+0.5
84,293	-		Echvi_0083	0.59	-0.0
84,293	-		Echvi_0083	0.59	-1.5
84,293	-		Echvi_0083	0.59	+0.5
84,296	+		Echvi_0083	0.60	-0.3
84,296	+		Echvi_0083	0.60	-2.2
84,296	+		Echvi_0083	0.60	-0.4
84,296	+		Echvi_0083	0.60	+0.1
84,296	+		Echvi_0083	0.60	+1.1
84,297	-		Echvi_0083	0.60	-1.1
84,363	-		Echvi_0083	0.70	+0.7
84,391	-		Echvi_0083	0.75	-0.9
84,463	+		Echvi_0083	0.86	+0.2
84,467	+		Echvi_0083	0.87	+1.2
84,467	+		Echvi_0083	0.87	-0.9
84,467	+		Echvi_0083	0.87	-1.8
84,468	-		Echvi_0083	0.87	-1.2
84,468	-		Echvi_0083	0.87	-2.5
84,470	+		Echvi_0083	0.87	-0.2
84,471	-		Echvi_0083	0.88	-0.4
84,548	+				-0.1
84,548	+				-1.5
84,548	+				-0.7
84,548	+				-1.3
84,548	+				-0.2
84,548	+				-0.4
84,548	+				-1.5
84,549	-				-1.0
84,549	-				+0.8
84,552	+				+0.5
84,552	+				-2.1
84,553	-				+0.2
84,553	-				-0.5
84,553	-				+0.1
84,553	-				+1.4
84,574	+				-0.2
84,575	-				-0.3
84,577	+				-0.6
84,578	-				+1.1
84,738	+		Echvi_0084	0.15	-1.9
84,739	-		Echvi_0084	0.15	-2.3
84,794	-				+1.7
84,831	+		Echvi_0084	0.23	+1.1
84,835	-		Echvi_0084	0.23	-2.1
84,911	+		Echvi_0084	0.29	-0.6