Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0003

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,712	+				-0.5
1,713	-				-1.5
1,723	-				-2.0
1,765	-				-0.9
1,818	+		Echvi_0002	0.11	-0.3
1,818	+		Echvi_0002	0.11	-0.4
1,818	+		Echvi_0002	0.11	+0.7
1,819	-		Echvi_0002	0.11	-0.0
1,821	+		Echvi_0002	0.11	-1.3
1,822	-		Echvi_0002	0.12	-0.3
1,824	-		Echvi_0002	0.12	+0.5
1,824	-		Echvi_0002	0.12	-0.0
2,091	+		Echvi_0002	0.46	-1.7
2,092	-		Echvi_0002	0.46	-2.6
2,268	-		Echvi_0002	0.69	-0.4
2,328	+		Echvi_0002	0.77	-0.4
2,329	-		Echvi_0002	0.77	-1.5
2,330	+		Echvi_0002	0.77	+1.0
2,330	+		Echvi_0002	0.77	+1.5
2,331	-		Echvi_0002	0.77	-0.1
2,342	+		Echvi_0002	0.79	-1.5
2,344	+		Echvi_0002	0.79	-1.0
2,344	+		Echvi_0002	0.79	-1.7
2,345	-		Echvi_0002	0.79	-1.3
2,345	-		Echvi_0002	0.79	-3.3
2,353	+		Echvi_0002	0.80	-0.4
2,367	+		Echvi_0002	0.82	-0.0
2,368	-		Echvi_0002	0.82	-3.2
2,370	+		Echvi_0002	0.82	+1.7
2,370	+		Echvi_0002	0.82	+0.8
2,405	-		Echvi_0002	0.87	-2.2
2,457	+				-0.3
2,485	+				-0.1
2,486	-				-0.3
2,487	+				-1.9
2,508	+				+1.7
2,509	-				+0.7
2,509	-				-1.7
2,512	+				-1.0
2,512	+				+0.2
2,512	+				+0.3
2,544	+				-0.6
2,544	+				-0.2
2,545	-				-1.6
2,545	-				-3.2
2,678	+		Echvi_0003	0.16	+0.7
2,767	+		Echvi_0003	0.24	-1.3
2,768	-		Echvi_0003	0.25	-0.5
3,134	+		Echvi_0003	0.61	-1.3
3,161	+		Echvi_0003	0.64	-0.1
3,161	+		Echvi_0003	0.64	-0.7
3,162	-		Echvi_0003	0.64	-1.0
3,232	-		Echvi_0003	0.71	-1.7
3,382	+		Echvi_0003	0.86	-0.9
3,383	-		Echvi_0003	0.86	-0.7
3,383	-		Echvi_0003	0.86	-0.0
3,563	-				+0.3
3,567	+				-1.5
3,616	+		Echvi_0004	0.16	-0.6
3,695	-		Echvi_0004	0.36	-1.4
3,695	-		Echvi_0004	0.36	-0.8
3,704	+		Echvi_0004	0.38	+1.2
3,705	-		Echvi_0004	0.38	+0.2
3,719	+		Echvi_0004	0.42	+0.1
3,785	-		Echvi_0004	0.58	+0.1
3,795	-		Echvi_0004	0.60	-1.1
3,876	-		Echvi_0004	0.80	-1.8
3,876	-		Echvi_0004	0.80	-0.3
3,925	-				-0.9
3,931	+				+0.1
3,931	+				-2.1
3,931	+				-0.0
3,932	-				-0.4
3,935	-				-1.4
3,936	+				-1.3
4,013	+				+1.1
4,014	-				-0.5
4,017	-				-1.0
4,049	+				-1.7