Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu0396 and Atu0397 are separated by 169 nucleotides Atu0397 and Atu0398 are separated by 128 nucleotides
Atu0396: Atu0396 - coenzyme A transferase, at 389,381 to 390,877
Atu0396
Atu0397: Atu0397 - hypothetical protein, at 391,047 to 392,369
Atu0397
Atu0398: Atu0398 - hypothetical protein, at 392,498 to 393,535
Atu0398
Position (kb) 391
392
393 Strain fitness (log2 ratio) -1
0
1 at 390.054 kb on - strand, within Atu0396 at 390.189 kb on - strand, within Atu0396 at 390.327 kb on - strand, within Atu0396 at 390.327 kb on - strand, within Atu0396 at 390.386 kb on - strand, within Atu0396 at 390.449 kb on + strand, within Atu0396 at 390.554 kb on - strand, within Atu0396 at 390.629 kb on - strand, within Atu0396 at 390.683 kb on - strand, within Atu0396 at 390.698 kb on - strand, within Atu0396 at 390.702 kb on - strand, within Atu0396 at 390.713 kb on + strand, within Atu0396 at 390.737 kb on + strand at 390.773 kb on - strand at 390.834 kb on + strand at 390.879 kb on - strand at 390.925 kb on + strand at 390.957 kb on + strand at 391.021 kb on + strand at 391.134 kb on + strand at 391.150 kb on + strand at 391.288 kb on + strand, within Atu0397 at 391.322 kb on + strand, within Atu0397 at 391.324 kb on - strand, within Atu0397 at 391.362 kb on - strand, within Atu0397 at 391.526 kb on - strand, within Atu0397 at 391.529 kb on + strand, within Atu0397 at 391.644 kb on + strand, within Atu0397 at 391.657 kb on - strand, within Atu0397 at 391.662 kb on + strand, within Atu0397 at 391.739 kb on - strand, within Atu0397 at 391.794 kb on + strand, within Atu0397 at 391.926 kb on - strand, within Atu0397 at 391.954 kb on + strand, within Atu0397 at 392.091 kb on + strand, within Atu0397 at 392.099 kb on - strand, within Atu0397 at 392.138 kb on + strand, within Atu0397 at 392.151 kb on - strand, within Atu0397 at 392.155 kb on + strand, within Atu0397 at 392.165 kb on - strand, within Atu0397 at 392.183 kb on + strand, within Atu0397 at 392.278 kb on + strand at 392.286 kb on - strand at 392.382 kb on + strand at 392.382 kb on + strand at 392.387 kb on + strand at 392.589 kb on + strand at 392.642 kb on + strand, within Atu0398 at 392.650 kb on - strand, within Atu0398 at 392.704 kb on - strand, within Atu0398 at 392.878 kb on + strand, within Atu0398 at 392.878 kb on + strand, within Atu0398 at 392.898 kb on + strand, within Atu0398 at 392.920 kb on + strand, within Atu0398 at 392.936 kb on + strand, within Atu0398 at 392.963 kb on - strand, within Atu0398 at 392.977 kb on + strand, within Atu0398 at 392.986 kb on + strand, within Atu0398 at 392.994 kb on - strand, within Atu0398 at 393.023 kb on - strand, within Atu0398 at 393.070 kb on + strand, within Atu0398 at 393.070 kb on + strand, within Atu0398 at 393.070 kb on + strand, within Atu0398 at 393.078 kb on - strand, within Atu0398 at 393.078 kb on - strand, within Atu0398 at 393.113 kb on - strand, within Atu0398 at 393.113 kb on - strand, within Atu0398 at 393.113 kb on - strand, within Atu0398 at 393.309 kb on + strand, within Atu0398
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 390,054 - Atu0396 0.45 +0.4 390,189 - Atu0396 0.54 +0.5 390,327 - Atu0396 0.63 +0.2 390,327 - Atu0396 0.63 -0.9 390,386 - Atu0396 0.67 -0.1 390,449 + Atu0396 0.71 -0.1 390,554 - Atu0396 0.78 -0.5 390,629 - Atu0396 0.83 -0.3 390,683 - Atu0396 0.87 -0.3 390,698 - Atu0396 0.88 +0.8 390,702 - Atu0396 0.88 +0.1 390,713 + Atu0396 0.89 +0.0 390,737 + +0.3 390,773 - +0.0 390,834 + +0.3 390,879 - +1.3 390,925 + +0.4 390,957 + -0.7 391,021 + +0.2 391,134 + -0.5 391,150 + +0.1 391,288 + Atu0397 0.18 +0.2 391,322 + Atu0397 0.21 +0.0 391,324 - Atu0397 0.21 -1.3 391,362 - Atu0397 0.24 +0.4 391,526 - Atu0397 0.36 -1.4 391,529 + Atu0397 0.36 -0.3 391,644 + Atu0397 0.45 -0.3 391,657 - Atu0397 0.46 -0.4 391,662 + Atu0397 0.46 -0.1 391,739 - Atu0397 0.52 -0.1 391,794 + Atu0397 0.56 -1.1 391,926 - Atu0397 0.66 -0.6 391,954 + Atu0397 0.69 -0.6 392,091 + Atu0397 0.79 -0.4 392,099 - Atu0397 0.80 +0.2 392,138 + Atu0397 0.82 -1.2 392,151 - Atu0397 0.83 -0.3 392,155 + Atu0397 0.84 -0.2 392,165 - Atu0397 0.85 -0.0 392,183 + Atu0397 0.86 -0.1 392,278 + -0.1 392,286 - -0.2 392,382 + -0.5 392,382 + +0.5 392,387 + -0.0 392,589 + +0.3 392,642 + Atu0398 0.14 +0.4 392,650 - Atu0398 0.15 +0.1 392,704 - Atu0398 0.20 +0.4 392,878 + Atu0398 0.37 +0.1 392,878 + Atu0398 0.37 -0.3 392,898 + Atu0398 0.39 -0.2 392,920 + Atu0398 0.41 -0.0 392,936 + Atu0398 0.42 -0.3 392,963 - Atu0398 0.45 +0.1 392,977 + Atu0398 0.46 -0.3 392,986 + Atu0398 0.47 +0.3 392,994 - Atu0398 0.48 +0.3 393,023 - Atu0398 0.51 -0.4 393,070 + Atu0398 0.55 +0.1 393,070 + Atu0398 0.55 +0.4 393,070 + Atu0398 0.55 -0.0 393,078 - Atu0398 0.56 +1.6 393,078 - Atu0398 0.56 +0.1 393,113 - Atu0398 0.59 +0.5 393,113 - Atu0398 0.59 -0.1 393,113 - Atu0398 0.59 -0.0 393,309 + Atu0398 0.78 +1.1
Or see this region's nucleotide sequence