Strain Fitness in Pseudomonas sp. RS175 around PFR28_04944

Experiment: trans-aconitic (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	trans-aconitic (C) 5 mM
5,634,012	+				+0.0
5,634,012	+				+0.4
5,634,013	-				+0.2
5,634,013	-				+0.2
5,634,013	-				-0.2
5,634,013	-				-0.3
5,634,013	-				+0.3
5,634,030	+				-0.3
5,634,030	+				+0.2
5,634,031	-				-0.4
5,634,031	-				+0.0
5,634,031	-				-0.3
5,634,031	-				-0.4
5,634,031	-				+0.1
5,634,059	+				+0.5
5,634,059	+				-2.2
5,634,059	+				+0.2
5,634,059	+				-0.5
5,634,059	+				-0.7
5,634,059	+				-0.3
5,634,059	+				+1.0
5,634,059	+				-1.2
5,634,059	+				+0.3
5,634,059	+				+0.4
5,634,060	-				-0.3
5,634,060	-				+0.2
5,634,431	-				+1.2
5,634,431	-				+0.1
5,634,456	+				-0.2
5,634,457	-				-0.1
5,634,457	-				+0.0
5,634,457	-				-1.3
5,634,505	+				-0.1
5,634,505	+				+0.3
5,634,505	+				+0.7
5,634,506	-				-0.7
5,634,532	+				+0.8
5,634,532	+				-0.1
5,634,533	-				-0.4
5,634,598	+				+0.4
5,634,599	-				+1.4
5,634,632	+				+0.2
5,634,632	+				+1.2
5,634,632	+				-0.7
5,634,633	-				-0.3
5,634,917	-				+0.3
5,634,936	+				-0.5
5,634,936	+				+0.3
5,634,937	-				-0.4
5,634,937	-				+0.5
5,634,937	-				-0.5
5,635,024	+				-0.2
5,635,025	-				-1.1
5,635,076	-				-3.0
5,635,344	+		PFR28_04944	0.27	-0.7
5,635,344	+		PFR28_04944	0.27	-0.6
5,635,344	+		PFR28_04944	0.27	-1.3
5,635,345	-		PFR28_04944	0.27	-0.0
5,635,582	+		PFR28_04944	0.44	-1.3
5,635,583	-		PFR28_04944	0.44	-2.0
5,635,583	-		PFR28_04944	0.44	-1.3
5,635,992	-		PFR28_04944	0.73	-2.0
5,635,992	-		PFR28_04944	0.73	+0.0
5,636,083	-		PFR28_04944	0.79	-0.6
5,636,104	-		PFR28_04944	0.80	-1.1
5,636,341	+				-1.7
5,636,789	+		PFR28_04945	0.37	-0.9
5,636,790	-		PFR28_04945	0.37	-0.8
5,636,960	+		PFR28_04945	0.53	+1.7
5,636,960	+		PFR28_04945	0.53	-1.0
5,636,960	+		PFR28_04945	0.53	-2.2
5,636,960	+		PFR28_04945	0.53	+0.4
5,636,960	+		PFR28_04945	0.53	-0.9
5,636,961	-		PFR28_04945	0.53	-0.3
5,636,961	-		PFR28_04945	0.53	-0.1
5,636,961	-		PFR28_04945	0.53	-1.7
5,637,112	-		PFR28_04945	0.67	-2.0
5,637,380	+				-1.6
5,637,380	+				-1.5
5,637,380	+				-2.0
5,637,380	+				-2.6
5,637,380	+				-1.6
5,637,380	+				-2.1
5,637,380	+				-3.8
5,637,381	-				-0.1
5,637,381	-				-0.2
5,637,381	-				+0.4
5,637,381	-				-0.9
5,637,381	-				-1.1
5,637,381	-				-1.1
5,637,381	-				-1.1
5,637,381	-				-0.4
5,637,381	-				-0.5