Strain Fitness in Pseudomonas sp. RS175 around PFR28_04425

Experiment: trans-aconitic (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	trans-aconitic (C) 5 mM
5,038,407	-				-0.4
5,038,407	-				-1.3
5,038,417	+				-0.3
5,038,417	+				-0.8
5,038,418	-				+2.5
5,038,483	+		PFR28_04425	0.13	-0.8
5,038,483	+		PFR28_04425	0.13	-2.1
5,038,484	-		PFR28_04425	0.14	+0.5
5,038,484	-		PFR28_04425	0.14	-1.4
5,038,484	-		PFR28_04425	0.14	-1.7
5,038,516	+		PFR28_04425	0.22	-1.6
5,038,516	+		PFR28_04425	0.22	-1.3
5,038,516	+		PFR28_04425	0.22	+0.5
5,038,516	+		PFR28_04425	0.22	-1.3
5,038,516	+		PFR28_04425	0.22	+0.0
5,038,516	+		PFR28_04425	0.22	-1.4
5,038,516	+		PFR28_04425	0.22	-1.9
5,038,516	+		PFR28_04425	0.22	-1.4
5,038,516	+		PFR28_04425	0.22	-0.4
5,038,516	+		PFR28_04425	0.22	-2.8
5,038,516	+		PFR28_04425	0.22	-0.4
5,038,516	+		PFR28_04425	0.22	-2.5
5,038,516	+		PFR28_04425	0.22	-2.2
5,038,516	+		PFR28_04425	0.22	-0.0
5,038,516	+		PFR28_04425	0.22	+0.1
5,038,516	+		PFR28_04425	0.22	-1.2
5,038,516	+		PFR28_04425	0.22	-1.6
5,038,516	+		PFR28_04425	0.22	-1.2
5,038,516	+		PFR28_04425	0.22	-2.7
5,038,516	+		PFR28_04425	0.22	+0.9
5,038,516	+		PFR28_04425	0.22	-1.9
5,038,517	-		PFR28_04425	0.22	-1.2
5,038,517	-		PFR28_04425	0.22	-2.9
5,038,517	-		PFR28_04425	0.22	-2.8
5,038,517	-		PFR28_04425	0.22	-2.1
5,038,517	-		PFR28_04425	0.22	+0.1
5,038,517	-		PFR28_04425	0.22	-1.4
5,038,517	-		PFR28_04425	0.22	-1.6
5,038,517	-		PFR28_04425	0.22	-1.0
5,038,517	-		PFR28_04425	0.22	-1.5
5,038,517	-		PFR28_04425	0.22	-1.9
5,038,517	-		PFR28_04425	0.22	-2.2
5,038,517	-		PFR28_04425	0.22	-1.3
5,038,517	-		PFR28_04425	0.22	-1.1
5,038,517	-		PFR28_04425	0.22	-1.9
5,038,517	-		PFR28_04425	0.22	-0.1
5,038,517	-		PFR28_04425	0.22	-1.4
5,038,593	-		PFR28_04425	0.42	-1.5
5,038,714	+		PFR28_04425	0.74	+1.3
5,038,730	-		PFR28_04425	0.78	-3.2
5,038,810	+				+1.4
5,038,811	-				+1.0
5,039,021	+		PFR28_04426	0.21	+0.0
5,039,073	-		PFR28_04426	0.28	+0.4
5,039,073	-		PFR28_04426	0.28	-1.4
5,039,106	+		PFR28_04426	0.32	-0.0
5,039,106	+		PFR28_04426	0.32	-0.1
5,039,107	-		PFR28_04426	0.32	-0.3
5,039,107	-		PFR28_04426	0.32	+0.0
5,039,145	-		PFR28_04426	0.37	-0.3
5,039,292	-		PFR28_04426	0.57	-0.2
5,039,292	-		PFR28_04426	0.57	+0.9
5,039,301	-		PFR28_04426	0.58	+0.0
5,039,402	+		PFR28_04426	0.72	+0.6
5,039,606	+				-0.3
5,039,606	+				+0.5
5,039,606	+				+0.1
5,039,606	+				-1.9
5,039,606	+				+0.0
5,039,606	+				+0.4
5,039,606	+				+0.7
5,039,606	+				+0.3
5,039,606	+				-0.1
5,039,606	+				-0.7
5,039,606	+				+1.6
5,039,606	+				+0.1
5,039,607	-				+0.0
5,039,607	-				-0.7
5,039,607	-				+0.4
5,039,722	+				-0.5
5,039,723	-				+0.2
5,039,723	-				+1.0
5,039,723	-				-0.9
5,039,723	-				-0.2
5,039,731	+				+1.6
5,039,731	+				+0.3
5,039,731	+				+0.6
5,039,731	+				+0.0
5,039,731	+				+1.5
5,039,731	+				+0.3
5,039,731	+				+0.1
5,039,731	+				+0.1
5,039,732	-				-0.8
5,039,732	-				-1.0
5,039,732	-				-1.3
5,039,732	-				-0.2
5,039,732	-				+0.2
5,039,732	-				+0.6
5,039,732	-				-0.6
5,039,751	-				+0.1
5,039,751	-				+0.9