Strain Fitness in Pseudomonas sp. RS175 around PFR28_03721

Experiment: trans-aconitic (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	trans-aconitic (C) 5 mM
4,288,268	+				-0.7
4,288,268	+				-2.1
4,288,268	+				-0.2
4,288,268	+				+0.7
4,288,268	+				-0.9
4,288,268	+				-1.4
4,288,268	+				-0.9
4,288,268	+				-0.2
4,288,268	+				-0.4
4,288,822	+				+0.8
4,288,823	-				+0.7
4,288,900	+				-0.4
4,288,900	+				+0.2
4,288,900	+				+0.7
4,288,901	-				+0.8
4,288,901	-				-0.0
4,288,901	-				-2.0
4,288,902	+				+0.8
4,288,902	+				-0.7
4,288,903	-				-0.1
4,288,903	-				+1.4
4,288,903	-				+0.3
4,288,903	-				+0.2
4,288,952	+				-0.4
4,288,952	+				+0.3
4,288,952	+				-0.5
4,288,952	+				-0.4
4,288,953	-				-0.2
4,288,953	-				+0.4
4,288,953	-				-0.5
4,288,953	-				+0.9
4,288,953	-				+1.2
4,288,953	-				-0.7
4,288,967	+				+1.8
4,288,967	+				+1.1
4,288,967	+				+0.7
4,288,968	-				-0.1
4,288,983	-				-0.0
4,289,017	+				-1.0
4,289,017	+				-0.4
4,289,017	+				+0.4
4,289,017	+				-0.9
4,289,018	-				-1.7
4,289,018	-				-2.6
4,289,020	+				-2.4
4,289,081	+				-1.6
4,289,081	+				-1.3
4,289,081	+				+1.0
4,289,081	+				-1.0
4,289,107	+		PFR28_03721	0.12	-1.1
4,289,130	+		PFR28_03721	0.15	+0.3
4,289,207	+		PFR28_03721	0.25	+0.3
4,289,207	+		PFR28_03721	0.25	-1.2
4,289,207	+		PFR28_03721	0.25	-1.8
4,289,207	+		PFR28_03721	0.25	-2.5
4,289,207	+		PFR28_03721	0.25	-2.4
4,289,207	+		PFR28_03721	0.25	-0.9
4,289,207	+		PFR28_03721	0.25	-1.6
4,289,207	+		PFR28_03721	0.25	-1.3
4,289,208	-		PFR28_03721	0.25	-2.5
4,289,276	+		PFR28_03721	0.33	-2.3
4,289,276	+		PFR28_03721	0.33	-0.5
4,289,276	+		PFR28_03721	0.33	-1.2
4,289,276	+		PFR28_03721	0.33	-0.8
4,289,277	-		PFR28_03721	0.33	-1.7
4,289,277	-		PFR28_03721	0.33	-2.1
4,289,646	+		PFR28_03721	0.80	-1.4
4,289,646	+		PFR28_03721	0.80	-2.0
4,289,646	+		PFR28_03721	0.80	-1.6
4,289,647	-		PFR28_03721	0.80	-1.7
4,289,647	-		PFR28_03721	0.80	-2.2
4,289,750	+				+0.2
4,289,750	+				-0.2
4,289,750	+				-0.6
4,289,751	-				-2.9
4,289,751	-				-2.8
4,289,826	-				-2.3
4,290,785	-				+0.5