Strain Fitness in Pseudomonas sp. RS175 around PFR28_03430

Experiment: trans-aconitic (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	trans-aconitic (C) 5 mM
3,937,240	+		PFR28_03429	0.26	-0.1
3,937,440	+		PFR28_03429	0.47	+0.0
3,937,440	+		PFR28_03429	0.47	+0.8
3,937,440	+		PFR28_03429	0.47	-2.1
3,937,440	+		PFR28_03429	0.47	-1.0
3,937,441	-		PFR28_03429	0.47	-0.6
3,937,457	+		PFR28_03429	0.49	-0.7
3,937,545	+		PFR28_03429	0.58	+0.1
3,937,545	+		PFR28_03429	0.58	+0.7
3,937,602	+		PFR28_03429	0.64	+0.6
3,937,943	-				+0.2
3,937,975	+				-0.3
3,937,975	+				-0.3
3,937,976	-				+2.1
3,937,976	-				+0.8
3,938,035	-				+0.3
3,938,035	-				+0.9
3,938,155	+				+0.1
3,938,155	+				-1.8
3,938,156	-				+0.3
3,938,156	-				-0.2
3,938,156	-				+0.3
3,938,156	-				+0.8
3,938,269	+		PFR28_03430	0.12	+0.3
3,938,270	-		PFR28_03430	0.12	-0.2
3,938,270	-		PFR28_03430	0.12	+0.1
3,938,490	+		PFR28_03430	0.30	-0.9
3,938,490	+		PFR28_03430	0.30	-2.2
3,938,491	-		PFR28_03430	0.30	+1.3
3,938,491	-		PFR28_03430	0.30	-2.0
3,938,491	-		PFR28_03430	0.30	-0.8
3,938,553	+		PFR28_03430	0.35	-2.0
3,938,553	+		PFR28_03430	0.35	+0.5
3,938,553	+		PFR28_03430	0.35	-0.3
3,938,553	+		PFR28_03430	0.35	-0.3
3,938,553	+		PFR28_03430	0.35	-0.5
3,938,553	+		PFR28_03430	0.35	-0.1
3,938,553	+		PFR28_03430	0.35	+0.6
3,938,554	-		PFR28_03430	0.35	-0.7
3,938,554	-		PFR28_03430	0.35	-3.8
3,938,554	-		PFR28_03430	0.35	-1.1
3,938,554	-		PFR28_03430	0.35	-0.4
3,938,554	-		PFR28_03430	0.35	-0.3
3,938,554	-		PFR28_03430	0.35	-0.3
3,938,554	-		PFR28_03430	0.35	-0.6
3,938,554	-		PFR28_03430	0.35	-0.4
3,938,666	+		PFR28_03430	0.44	-1.2
3,938,666	+		PFR28_03430	0.44	-1.2
3,938,666	+		PFR28_03430	0.44	+0.4
3,938,667	-		PFR28_03430	0.45	-2.4
3,938,667	-		PFR28_03430	0.45	-0.2
3,938,667	-		PFR28_03430	0.45	-0.4
3,938,667	-		PFR28_03430	0.45	-1.2
3,938,730	+		PFR28_03430	0.50	-0.4
3,938,730	+		PFR28_03430	0.50	-1.5
3,938,764	+		PFR28_03430	0.53	-0.4
3,938,764	+		PFR28_03430	0.53	-0.6
3,938,971	-		PFR28_03430	0.70	-0.9
3,939,059	+		PFR28_03430	0.77	-1.2
3,939,060	-		PFR28_03430	0.77	-0.5
3,939,128	-		PFR28_03430	0.82	+0.9
3,939,238	-				+0.4
3,939,238	-				+0.3
3,939,238	-				+0.6
3,939,238	-				-2.0
3,939,364	-				-0.7
3,939,485	-				+0.1