Strain Fitness in Pseudomonas sp. RS175 around PFR28_03209

Experiment: trans-aconitic (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	trans-aconitic (C) 5 mM
3,716,129	+		PFR28_03208	0.29	-0.0
3,716,129	+		PFR28_03208	0.29	-0.4
3,716,129	+		PFR28_03208	0.29	-1.3
3,716,130	-		PFR28_03208	0.29	-0.9
3,716,130	-		PFR28_03208	0.29	+0.1
3,716,130	-		PFR28_03208	0.29	+3.1
3,716,255	+		PFR28_03208	0.38	-0.6
3,716,352	-		PFR28_03208	0.45	-0.0
3,716,352	-		PFR28_03208	0.45	-0.4
3,716,389	-		PFR28_03208	0.48	-0.0
3,716,770	+		PFR28_03208	0.75	-1.9
3,716,770	+		PFR28_03208	0.75	-1.6
3,716,921	+		PFR28_03208	0.86	-1.3
3,717,299	-		PFR28_03209	0.29	-0.8
3,717,299	-		PFR28_03209	0.29	-0.2
3,717,299	-		PFR28_03209	0.29	-0.6
3,717,299	-		PFR28_03209	0.29	-0.9
3,717,299	-		PFR28_03209	0.29	-3.1
3,717,434	+		PFR28_03209	0.51	-1.4
3,717,434	+		PFR28_03209	0.51	-0.0
3,717,434	+		PFR28_03209	0.51	-0.3
3,717,653	+		PFR28_03209	0.85	-1.5
3,717,653	+		PFR28_03209	0.85	-0.0
3,717,653	+		PFR28_03209	0.85	-2.0
3,717,935	-				+0.0
3,717,935	-				+1.4
3,717,935	-				+0.2
3,717,935	-				+0.3
3,717,935	-				-0.2
3,718,062	+				+0.7
3,718,062	+				+0.5
3,718,063	-				+1.1
3,718,063	-				+2.4
3,718,063	-				+0.2
3,718,063	-				-0.9
3,718,276	+		PFR28_03210	0.14	-0.1
3,718,276	+		PFR28_03210	0.14	-0.2
3,718,277	-		PFR28_03210	0.14	-0.0
3,718,277	-		PFR28_03210	0.14	+0.5
3,718,277	-		PFR28_03210	0.14	-0.4
3,718,297	-		PFR28_03210	0.17	+0.5
3,718,309	+		PFR28_03210	0.19	+0.8
3,718,561	+		PFR28_03210	0.63	+0.9
3,718,561	+		PFR28_03210	0.63	-0.8
3,718,561	+		PFR28_03210	0.63	-0.5
3,718,561	+		PFR28_03210	0.63	+0.1
3,718,562	-		PFR28_03210	0.63	-0.2
3,718,562	-		PFR28_03210	0.63	-0.5
3,718,562	-		PFR28_03210	0.63	-3.0
3,718,690	+		PFR28_03210	0.85	+0.1
3,718,691	-		PFR28_03210	0.85	-0.9
3,718,691	-		PFR28_03210	0.85	+0.4
3,718,691	-		PFR28_03210	0.85	-0.3
3,718,691	-		PFR28_03210	0.85	+0.2
3,718,699	+		PFR28_03210	0.86	-0.5
3,718,735	+				+0.0
3,718,735	+				+0.7
3,718,736	-				+0.2