Strain Fitness in Pseudomonas sp. RS175 around PFR28_02750

Experiment: trans-aconitic (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	trans-aconitic (C) 5 mM
3,215,763	-		PFR28_02749	0.35	+0.5
3,216,131	+		PFR28_02749	0.60	-1.1
3,216,131	+		PFR28_02749	0.60	+0.5
3,216,131	+		PFR28_02749	0.60	-0.9
3,216,132	-		PFR28_02749	0.60	-0.1
3,216,132	-		PFR28_02749	0.60	+0.2
3,216,159	+		PFR28_02749	0.62	+0.3
3,216,162	-		PFR28_02749	0.62	-0.5
3,216,284	+		PFR28_02749	0.70	+0.4
3,216,285	-		PFR28_02749	0.71	-0.4
3,216,285	-		PFR28_02749	0.71	-0.7
3,216,285	-		PFR28_02749	0.71	+0.3
3,216,321	-		PFR28_02749	0.73	-0.2
3,216,321	-		PFR28_02749	0.73	-0.6
3,216,422	+		PFR28_02749	0.80	-1.0
3,216,423	-		PFR28_02749	0.80	+0.5
3,216,423	-		PFR28_02749	0.80	-0.3
3,216,645	-				-1.2
3,216,708	+				-0.3
3,216,708	+				-0.3
3,216,708	+				-0.7
3,216,708	+				-0.1
3,216,708	+				-0.3
3,216,709	-				+0.3
3,216,709	-				-0.5
3,216,709	-				+0.5
3,216,709	-				-0.1
3,216,709	-				-0.7
3,216,709	-				+0.2
3,216,709	-				-0.7
3,216,709	-				-0.1
3,216,850	+		PFR28_02750	0.32	-1.7
3,216,850	+		PFR28_02750	0.32	+0.1
3,216,850	+		PFR28_02750	0.32	-0.7
3,216,851	-		PFR28_02750	0.32	-2.5
3,217,000	+		PFR28_02750	0.67	-1.0
3,217,207	+				+1.5
3,217,220	+				-0.7
3,217,221	-				-0.4
3,217,231	-				-0.6
3,217,240	+				-0.3
3,217,270	+				+0.1
3,217,270	+				+0.0
3,217,271	-				-1.4
3,217,271	-				+0.6
3,217,278	-				+0.8
3,217,278	-				-1.5
3,217,278	-				+1.3
3,217,344	+				-0.3
3,217,344	+				-1.2
3,217,345	-				+0.1
3,217,345	-				-0.9
3,217,366	+				-0.7
3,217,426	+				+0.0
3,217,426	+				-0.8
3,217,427	-				-0.8
3,217,448	-				-1.2
3,217,544	+				-0.0
3,217,708	+				-1.5
3,217,709	-				+0.1
3,217,709	-				-1.1
3,217,709	-				-0.3
3,217,837	+		PFR28_02751	0.13	-0.5
3,217,838	-		PFR28_02751	0.13	-0.5
3,217,838	-		PFR28_02751	0.13	-0.1
3,217,838	-		PFR28_02751	0.13	+0.6
3,217,838	-		PFR28_02751	0.13	-0.3