Strain Fitness in Pseudomonas sp. RS175 around PFR28_02608

Experiment: trans-aconitic (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	trans-aconitic (C) 5 mM
3,081,334	+				+0.1
3,081,334	+				-0.6
3,081,334	+				-0.2
3,081,334	+				+0.3
3,081,335	-				-0.3
3,081,412	-				+0.4
3,081,412	-				-0.2
3,081,415	+				-0.0
3,081,415	+				-0.0
3,081,416	-				-0.2
3,081,450	+				-0.2
3,081,450	+				+0.2
3,081,450	+				+1.3
3,081,450	+				+0.1
3,081,554	-				+0.1
3,081,591	+				-0.6
3,081,591	+				-0.2
3,081,591	+				-1.4
3,082,669	-		PFR28_02608	0.17	-1.8
3,082,669	-		PFR28_02608	0.17	-1.2
3,082,669	-		PFR28_02608	0.17	-1.5
3,082,669	-		PFR28_02608	0.17	-2.5
3,082,993	-		PFR28_02608	0.31	-2.3
3,083,517	-		PFR28_02608	0.53	-2.4
3,084,787	-				-0.4
3,084,787	-				+1.4
3,084,790	-				-2.2
3,084,796	-				+0.5
3,084,796	-				+1.0
3,084,881	+				-0.3
3,084,881	+				+0.5
3,084,889	+				-2.3
3,084,889	+				-1.1
3,084,990	+				+0.6
3,084,990	+				-1.8
3,085,058	+				+0.6
3,085,073	+				-0.8
3,085,074	-				+0.1
3,085,074	-				+0.1
3,085,256	-		PFR28_02609	0.26	-0.8
3,085,313	+		PFR28_02609	0.32	-0.0
3,085,313	+		PFR28_02609	0.32	-1.2
3,085,313	+		PFR28_02609	0.32	+1.0
3,085,313	+		PFR28_02609	0.32	+0.1
3,085,313	+		PFR28_02609	0.32	-1.8
3,085,313	+		PFR28_02609	0.32	-0.2
3,085,313	+		PFR28_02609	0.32	+0.5
3,085,313	+		PFR28_02609	0.32	-0.8
3,085,313	+		PFR28_02609	0.32	-0.9
3,085,313	+		PFR28_02609	0.32	+0.0
3,085,313	+		PFR28_02609	0.32	-2.4
3,085,313	+		PFR28_02609	0.32	-0.4
3,085,313	+		PFR28_02609	0.32	+0.9
3,085,313	+		PFR28_02609	0.32	-0.5
3,085,313	+		PFR28_02609	0.32	-0.1
3,085,314	-		PFR28_02609	0.32	+1.2
3,085,314	-		PFR28_02609	0.32	-0.2
3,085,314	-		PFR28_02609	0.32	-0.1
3,085,314	-		PFR28_02609	0.32	-0.4
3,085,314	-		PFR28_02609	0.32	+0.2
3,085,314	-		PFR28_02609	0.32	+0.1
3,085,314	-		PFR28_02609	0.32	+0.3
3,085,314	-		PFR28_02609	0.32	-1.4
3,085,314	-		PFR28_02609	0.32	+0.0
3,085,314	-		PFR28_02609	0.32	-2.0
3,085,314	-		PFR28_02609	0.32	+0.1
3,085,314	-		PFR28_02609	0.32	+0.2
3,085,314	-		PFR28_02609	0.32	-0.0
3,085,314	-		PFR28_02609	0.32	-0.1
3,085,314	-		PFR28_02609	0.32	-0.7
3,085,314	-		PFR28_02609	0.32	+0.9
3,085,314	-		PFR28_02609	0.32	-0.9
3,085,315	+		PFR28_02609	0.32	+0.2
3,085,315	+		PFR28_02609	0.32	-1.4
3,085,316	-		PFR28_02609	0.33	-0.2
3,085,358	+		PFR28_02609	0.37	+1.0
3,085,358	+		PFR28_02609	0.37	-0.8
3,085,359	-		PFR28_02609	0.37	-0.9
3,085,493	+		PFR28_02609	0.51	+0.6
3,085,493	+		PFR28_02609	0.51	-0.0
3,085,493	+		PFR28_02609	0.51	+0.6
3,085,493	+		PFR28_02609	0.51	+0.7
3,085,493	+		PFR28_02609	0.51	-1.3
3,085,493	+		PFR28_02609	0.51	-0.6
3,085,493	+		PFR28_02609	0.51	+0.2
3,085,494	-		PFR28_02609	0.51	-0.5
3,085,494	-		PFR28_02609	0.51	-0.2
3,085,494	-		PFR28_02609	0.51	-0.8
3,085,494	-		PFR28_02609	0.51	-3.0
3,085,560	+		PFR28_02609	0.58	+1.2
3,085,560	+		PFR28_02609	0.58	-0.2
3,085,600	+		PFR28_02609	0.62	-0.8