Strain Fitness in Pseudomonas sp. RS175 around PFR28_02344

Experiment: trans-aconitic (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	trans-aconitic (C) 5 mM
2,798,097	+		PFR28_02343	0.13	+0.5
2,798,097	+		PFR28_02343	0.13	+0.9
2,798,098	-		PFR28_02343	0.14	-0.2
2,798,104	-		PFR28_02343	0.14	+0.1
2,798,104	-		PFR28_02343	0.14	-0.3
2,798,196	+		PFR28_02343	0.27	-1.2
2,798,197	-		PFR28_02343	0.27	+0.2
2,798,197	-		PFR28_02343	0.27	+0.9
2,798,214	+		PFR28_02343	0.29	+0.3
2,798,250	+		PFR28_02343	0.34	+0.1
2,798,250	+		PFR28_02343	0.34	+1.1
2,798,251	-		PFR28_02343	0.34	+0.2
2,798,251	-		PFR28_02343	0.34	+0.4
2,798,251	-		PFR28_02343	0.34	+0.1
2,798,328	+		PFR28_02343	0.45	-0.8
2,798,329	-		PFR28_02343	0.45	+0.8
2,798,329	-		PFR28_02343	0.45	+0.2
2,798,329	-		PFR28_02343	0.45	-0.3
2,798,329	-		PFR28_02343	0.45	-0.1
2,798,385	+		PFR28_02343	0.53	+0.2
2,798,968	-				+1.1
2,799,018	+				-0.4
2,799,059	-				-0.9
2,799,233	+		PFR28_02344	0.12	-1.2
2,799,234	-		PFR28_02344	0.12	-1.5
2,799,234	-		PFR28_02344	0.12	-0.2
2,799,611	+		PFR28_02344	0.34	-3.3
2,799,611	+		PFR28_02344	0.34	-0.2
2,799,611	+		PFR28_02344	0.34	-1.8
2,799,612	-		PFR28_02344	0.34	-1.0
2,799,612	-		PFR28_02344	0.34	-0.1
2,799,612	-		PFR28_02344	0.34	-0.5
2,799,818	+		PFR28_02344	0.46	-1.2
2,799,818	+		PFR28_02344	0.46	+0.7
2,800,116	-		PFR28_02344	0.64	-0.1
2,800,134	+		PFR28_02344	0.65	-0.9
2,800,172	+		PFR28_02344	0.67	-0.7
2,800,271	+		PFR28_02344	0.73	+0.2
2,800,272	-		PFR28_02344	0.73	+0.1
2,800,379	+		PFR28_02344	0.79	-1.5
2,800,379	+		PFR28_02344	0.79	-1.6
2,800,379	+		PFR28_02344	0.79	-0.9
2,800,380	-		PFR28_02344	0.79	-1.8
2,800,546	+		PFR28_02344	0.89	-0.6
2,800,547	-		PFR28_02344	0.89	-0.9
2,800,578	-				-0.6
2,800,792	+				-0.5
2,800,861	+				-0.2
2,800,861	+				-0.5
2,800,861	+				+1.7
2,800,861	+				-2.9
2,800,861	+				-1.0
2,800,861	+				-0.6
2,800,862	-				-1.3
2,800,862	-				+1.3
2,800,862	-				-1.1
2,800,862	-				-0.3
2,801,375	+		PFR28_02345	0.39	-0.8
2,801,375	+		PFR28_02345	0.39	-0.1
2,801,375	+		PFR28_02345	0.39	-1.2
2,801,375	+		PFR28_02345	0.39	-1.7
2,801,375	+		PFR28_02345	0.39	-1.0
2,801,376	-		PFR28_02345	0.39	-0.4
2,801,376	-		PFR28_02345	0.39	-1.9
2,801,542	+		PFR28_02345	0.49	-0.5
2,801,543	-		PFR28_02345	0.49	-0.5
2,801,543	-		PFR28_02345	0.49	-1.0
2,801,543	-		PFR28_02345	0.49	-0.8
2,801,543	-		PFR28_02345	0.49	-3.3
2,801,659	+		PFR28_02345	0.56	-3.7
2,801,660	-		PFR28_02345	0.56	-0.4
2,801,660	-		PFR28_02345	0.56	-0.5
2,801,660	-		PFR28_02345	0.56	-0.1
2,801,695	+		PFR28_02345	0.58	-0.3