Strain Fitness in Pseudomonas sp. RS175 around PFR28_00941

Experiment: trans-aconitic (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	trans-aconitic (C) 5 mM
1,023,805	-		PFR28_00940	0.57	+0.5
1,023,820	-		PFR28_00940	0.58	-0.2
1,023,820	-		PFR28_00940	0.58	-0.3
1,023,869	+		PFR28_00940	0.60	+1.9
1,023,869	+		PFR28_00940	0.60	-0.5
1,023,870	-		PFR28_00940	0.60	-0.3
1,024,401	+		PFR28_00940	0.86	+0.6
1,024,402	-		PFR28_00940	0.86	+0.5
1,024,402	-		PFR28_00940	0.86	-0.9
1,024,438	-		PFR28_00940	0.88	+0.2
1,024,612	-				-0.3
1,024,612	-				-0.2
1,024,612	-				+0.6
1,024,642	+				-0.9
1,024,770	+				-0.5
1,025,159	+		PFR28_00941	0.74	-1.0
1,025,409	-				-1.5
1,025,435	-				+0.9
1,025,435	-				+1.5
1,025,435	-				+0.4
1,025,435	-				+0.5
1,025,435	-				-0.2
1,025,466	+				+0.4
1,025,540	+				-0.3
1,025,540	+				+0.4
1,025,540	+				+1.2
1,025,540	+				-0.3
1,025,540	+				-0.2
1,025,540	+				-0.6
1,025,540	+				+0.9
1,025,540	+				+1.2
1,025,541	-				+1.0
1,025,541	-				-0.6
1,025,541	-				+0.4
1,025,748	+		PFR28_00942	0.12	-0.2
1,025,748	+		PFR28_00942	0.12	-0.0
1,025,748	+		PFR28_00942	0.12	-0.2
1,025,749	-		PFR28_00942	0.12	-0.9
1,025,840	+		PFR28_00942	0.15	-0.8
1,025,840	+		PFR28_00942	0.15	-0.6
1,025,840	+		PFR28_00942	0.15	+0.1
1,025,840	+		PFR28_00942	0.15	-0.2
1,025,840	+		PFR28_00942	0.15	-0.9
1,025,841	-		PFR28_00942	0.15	+1.0
1,025,841	-		PFR28_00942	0.15	+0.1
1,025,841	-		PFR28_00942	0.15	-1.7
1,025,841	-		PFR28_00942	0.15	+1.3
1,025,842	+		PFR28_00942	0.15	+0.2
1,025,843	-		PFR28_00942	0.15	-0.0
1,026,014	+		PFR28_00942	0.22	-0.2
1,026,014	+		PFR28_00942	0.22	+0.7
1,026,014	+		PFR28_00942	0.22	+0.3
1,026,015	-		PFR28_00942	0.22	-0.1
1,026,015	-		PFR28_00942	0.22	-1.5
1,026,071	-		PFR28_00942	0.24	+0.8