Strain Fitness in Pseudomonas sp. RS175 around PFR28_02432

Experiment: trans-aconitic (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	trans-aconitic (C) 5 mM
2,899,248	-				+2.1
2,899,248	-				+0.8
2,899,292	+				+2.1
2,899,293	-				+0.1
2,899,293	-				+0.3
2,899,400	+				+0.9
2,899,400	+				-0.5
2,899,401	-				-2.1
2,899,401	-				+0.6
2,899,401	-				-0.6
2,899,401	-				-0.3
2,899,421	+		PFR28_02431	0.11	+0.6
2,899,421	+		PFR28_02431	0.11	-0.3
2,899,421	+		PFR28_02431	0.11	-3.7
2,899,422	-		PFR28_02431	0.11	-0.2
2,899,427	+		PFR28_02431	0.11	+1.0
2,899,428	-		PFR28_02431	0.12	-0.3
2,899,428	-		PFR28_02431	0.12	+2.0
2,899,428	-		PFR28_02431	0.12	+0.9
2,899,428	-		PFR28_02431	0.12	-0.0
2,899,506	+		PFR28_02431	0.20	+0.6
2,899,506	+		PFR28_02431	0.20	-0.4
2,899,506	+		PFR28_02431	0.20	-0.5
2,899,507	-		PFR28_02431	0.20	+0.9
2,899,507	-		PFR28_02431	0.20	-0.1
2,899,507	-		PFR28_02431	0.20	+0.2
2,899,507	-		PFR28_02431	0.20	-0.1
2,899,507	-		PFR28_02431	0.20	-0.8
2,899,507	-		PFR28_02431	0.20	+1.1
2,899,855	+		PFR28_02431	0.58	-0.6
2,899,855	+		PFR28_02431	0.58	+0.3
2,899,855	+		PFR28_02431	0.58	+0.0
2,899,856	-		PFR28_02431	0.58	-0.3
2,899,856	-		PFR28_02431	0.58	+0.4
2,900,033	-		PFR28_02431	0.77	+0.5
2,900,033	-		PFR28_02431	0.77	+0.4
2,900,033	-		PFR28_02431	0.77	+2.4
2,900,111	-		PFR28_02431	0.85	+0.6
2,900,222	-				+1.7
2,900,282	+				-3.6
2,900,283	-				+0.7
2,900,330	+				+1.4
2,900,330	+				+0.6
2,900,330	+				+0.7
2,900,330	+				+1.2
2,900,330	+				-0.3
2,900,330	+				+0.1
2,900,330	+				+1.4
2,900,330	+				-1.4
2,900,331	-				-3.4
2,900,331	-				+0.1
2,900,331	-				+0.9
2,900,333	+				-0.5
2,900,333	+				-0.7
2,900,333	+				+1.2
2,900,333	+				-0.3
2,900,334	-				+0.0
2,900,334	-				-1.2
2,900,334	-				+0.4
2,900,334	-				+0.4
2,901,197	+		PFR28_02432	0.70	+0.0
2,901,197	+		PFR28_02432	0.70	+0.2
2,901,198	-		PFR28_02432	0.70	-0.3
2,901,198	-		PFR28_02432	0.70	-1.7
2,901,393	+		PFR28_02432	0.84	+0.2
2,901,394	-		PFR28_02432	0.85	+0.4
2,901,453	-		PFR28_02432	0.89	-2.3
2,901,453	-		PFR28_02432	0.89	-0.1
2,901,453	-		PFR28_02432	0.89	-0.3
2,901,453	-		PFR28_02432	0.89	-0.7
2,901,535	+				-0.9
2,901,536	-				+0.2
2,901,536	-				-0.2
2,901,677	-				-0.3
2,901,701	-		PFR28_02433	0.18	+0.4
2,901,701	-		PFR28_02433	0.18	+0.6
2,901,768	+		PFR28_02433	0.45	-2.4
2,901,768	+		PFR28_02433	0.45	+0.3
2,901,768	+		PFR28_02433	0.45	+0.8
2,901,768	+		PFR28_02433	0.45	+0.3
2,901,768	+		PFR28_02433	0.45	+1.6
2,901,769	-		PFR28_02433	0.45	-2.5
2,901,769	-		PFR28_02433	0.45	-1.6
2,901,772	-		PFR28_02433	0.46	+0.9
2,901,772	-		PFR28_02433	0.46	+0.5
2,901,772	-		PFR28_02433	0.46	+0.9
2,901,772	-		PFR28_02433	0.46	-0.2
2,901,802	+		PFR28_02433	0.58	+0.1
2,901,802	+		PFR28_02433	0.58	+0.4
2,901,803	-		PFR28_02433	0.59	-0.1
2,902,018	+				-1.1
2,902,019	-				-0.8
2,902,078	+				-1.2
2,902,078	+				-1.6
2,902,078	+				+0.8
2,902,078	+				-1.2
2,902,079	-				-0.1
2,902,079	-				+1.1
2,902,079	-				+1.1
2,902,240	-				+0.4
2,902,267	+				+0.7
2,902,268	-				-0.4
2,902,527	+		PFR28_02434	0.26	-2.2
2,902,527	+		PFR28_02434	0.26	+1.5
2,902,527	+		PFR28_02434	0.26	-0.0
2,902,528	-		PFR28_02434	0.26	-0.4
2,902,528	-		PFR28_02434	0.26	-0.3