Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4643

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
5,555,402	+		Echvi_4641	0.89	-2.9
5,555,402	+		Echvi_4641	0.89	+0.0
5,555,402	+		Echvi_4641	0.89	+0.5
5,555,422	-		Echvi_4641	0.90	+2.3
5,555,464	-				-0.8
5,555,522	+				-1.1
5,555,522	+				+1.2
5,555,522	+				-1.1
5,555,522	+				+0.1
5,555,522	+				+0.1
5,555,523	-				+0.4
5,555,523	-				+0.1
5,555,540	-				-0.6
5,555,551	+				+0.8
5,555,553	+				+1.8
5,555,554	-				+0.4
5,555,554	-				+0.1
5,555,554	-				+1.7
5,555,600	+				-0.2
5,555,624	+				-1.4
5,555,638	-				+0.2
5,555,706	+		Echvi_4642	0.13	-0.3
5,555,707	-		Echvi_4642	0.13	+1.4
5,555,820	+		Echvi_4642	0.31	+1.2
5,555,820	+		Echvi_4642	0.31	+1.0
5,555,821	-		Echvi_4642	0.32	+1.9
5,555,977	+		Echvi_4642	0.56	+0.5
5,555,985	-		Echvi_4642	0.58	+0.8
5,555,985	-		Echvi_4642	0.58	+1.4
5,556,030	-		Echvi_4642	0.65	+1.4
5,556,112	+		Echvi_4642	0.78	+1.7
5,556,113	-		Echvi_4642	0.78	+0.7
5,556,113	-		Echvi_4642	0.78	+3.1
5,556,136	+		Echvi_4642	0.82	+1.3
5,556,192	-				+1.8
5,556,250	-				+0.0
5,556,252	+				-0.2
5,556,254	+				-0.6
5,556,266	+				-0.3
5,556,289	-				+0.4
5,556,351	+				+0.7
5,556,351	+				-0.3
5,556,351	+				-0.5
5,556,362	-				-0.5
5,556,362	-				-0.2
5,556,409	+				-1.2
5,557,377	+				-0.5
5,557,381	-				+1.2
5,557,381	-				-0.7
5,557,390	+		Echvi_4644	0.10	+0.9
5,557,468	+		Echvi_4644	0.32	+0.8
5,557,469	-		Echvi_4644	0.33	+1.7
5,557,519	+		Echvi_4644	0.47	+0.8
5,557,588	-		Echvi_4644	0.66	-2.0
5,557,621	-		Echvi_4644	0.76	+1.6
5,557,622	+		Echvi_4644	0.76	+2.1
5,557,712	-				-1.2
5,557,728	+				+0.9
5,557,756	-				+1.4
5,557,775	-				+0.8
5,557,775	-				+1.4
5,557,809	+				+1.1
5,557,810	-				+1.0
5,557,829	+				+2.1
5,557,936	-				+5.1