Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4539

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
5,427,689	+				-0.1
5,427,697	+				-0.9
5,427,711	+				+0.5
5,427,712	-				+0.5
5,427,720	-				+0.7
5,428,147	+		Echvi_4538	0.46	+1.2
5,428,148	-		Echvi_4538	0.46	+0.7
5,428,172	-		Echvi_4538	0.48	-0.0
5,428,186	+		Echvi_4538	0.50	-0.8
5,428,187	-		Echvi_4538	0.50	+1.1
5,428,192	+		Echvi_4538	0.50	-2.6
5,428,356	+		Echvi_4538	0.66	-0.6
5,428,431	+		Echvi_4538	0.74	+0.8
5,428,431	+		Echvi_4538	0.74	-0.2
5,428,431	+		Echvi_4538	0.74	-0.5
5,428,572	+		Echvi_4538	0.88	-0.4
5,428,681	+				-1.2
5,428,682	-				+0.4
5,428,687	-				+0.3
5,428,687	-				+1.1
5,428,695	+				+0.1
5,428,695	+				-1.3
5,428,700	+				-1.2
5,428,727	-				+0.0
5,428,735	+				-0.1
5,428,800	-		Echvi_4539	0.11	+0.1
5,428,875	+		Echvi_4539	0.19	+1.3
5,428,876	-		Echvi_4539	0.19	-0.9
5,428,876	-		Echvi_4539	0.19	-0.6
5,428,876	-		Echvi_4539	0.19	+0.5
5,428,905	-		Echvi_4539	0.22	-0.9
5,429,046	+		Echvi_4539	0.37	+2.1
5,429,046	+		Echvi_4539	0.37	+0.6
5,429,062	+		Echvi_4539	0.38	-0.8
5,429,246	-		Echvi_4539	0.57	+1.0
5,429,356	+		Echvi_4539	0.69	+0.1
5,429,356	+		Echvi_4539	0.69	-0.1
5,429,357	-		Echvi_4539	0.69	+2.8
5,429,357	-		Echvi_4539	0.69	-0.1
5,429,389	+		Echvi_4539	0.72	-1.1
5,429,389	+		Echvi_4539	0.72	+1.5
5,429,389	+		Echvi_4539	0.72	+0.5
5,429,390	-		Echvi_4539	0.72	+0.1
5,429,414	-		Echvi_4539	0.75	-0.1
5,429,414	-		Echvi_4539	0.75	+0.2
5,429,466	+		Echvi_4539	0.80	+0.4
5,429,466	+		Echvi_4539	0.80	+0.9
5,429,615	-				-0.5
5,429,667	+				-0.8
5,429,770	+		Echvi_4540	0.12	-1.9
5,429,775	+		Echvi_4540	0.13	-0.1
5,429,775	+		Echvi_4540	0.13	+1.5
5,429,826	+		Echvi_4540	0.19	-0.9
5,429,827	-		Echvi_4540	0.19	+1.1
5,429,827	-		Echvi_4540	0.19	+1.3
5,429,961	-		Echvi_4540	0.35	-0.5
5,430,041	+		Echvi_4540	0.44	+0.8
5,430,041	+		Echvi_4540	0.44	-1.1
5,430,041	+		Echvi_4540	0.44	-0.5
5,430,087	-		Echvi_4540	0.50	+0.4
5,430,132	+		Echvi_4540	0.55	+0.1
5,430,292	+		Echvi_4540	0.74	+0.3
5,430,492	-				-0.7
5,430,492	-				+1.1
5,430,503	-				+0.1
5,430,503	-				-0.5
5,430,506	+				-0.9
5,430,514	+				-0.7
5,430,537	+				-0.7
5,430,538	-				-0.1
5,430,541	-				-0.7
5,430,545	-				-0.2
5,430,547	+				+0.5
5,430,576	+				-0.2
5,430,604	-				-1.1
5,430,618	-				-0.4
5,430,620	+				-0.4