Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4271

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
5,121,844	-				+1.2
5,121,875	+				-0.2
5,121,892	-				-0.5
5,121,894	+				+3.7
5,121,990	+		Echvi_4269	0.22	-0.4
5,121,990	+		Echvi_4269	0.22	-1.0
5,121,990	+		Echvi_4269	0.22	-0.9
5,121,991	-		Echvi_4269	0.22	-0.1
5,121,997	+		Echvi_4269	0.23	+0.6
5,121,998	-		Echvi_4269	0.23	-0.5
5,122,049	+		Echvi_4269	0.32	-0.3
5,122,126	+		Echvi_4269	0.45	-0.7
5,122,291	-		Echvi_4269	0.74	-0.8
5,122,419	+				+1.3
5,122,485	-				-1.2
5,122,519	+		Echvi_4270	0.17	-0.8
5,122,527	+		Echvi_4270	0.19	-0.2
5,122,532	-		Echvi_4270	0.20	-0.7
5,122,560	-		Echvi_4270	0.28	-0.5
5,122,579	+		Echvi_4270	0.34	-1.1
5,122,583	+		Echvi_4270	0.35	-1.1
5,122,583	+		Echvi_4270	0.35	-0.6
5,122,628	+		Echvi_4270	0.47	-1.1
5,122,701	+		Echvi_4270	0.68	-0.2
5,122,704	+		Echvi_4270	0.69	-1.4
5,122,704	+		Echvi_4270	0.69	-0.9
5,122,719	-		Echvi_4270	0.73	-0.2
5,122,719	-		Echvi_4270	0.73	+0.2
5,122,719	-		Echvi_4270	0.73	-1.1
5,122,725	-		Echvi_4270	0.75	+0.1
5,122,725	-		Echvi_4270	0.75	-0.3
5,122,783	+				+0.0
5,122,790	-				-1.2
5,122,790	-				-0.1
5,122,802	+				+0.8
5,122,802	+				-1.1
5,122,803	-				-1.1
5,122,825	-				-1.1
5,122,825	-				+0.7
5,122,826	+				+0.9
5,122,826	+				+0.5
5,122,854	-				-0.7
5,122,897	+		Echvi_4271	0.21	+0.3
5,122,926	+		Echvi_4271	0.29	+0.1
5,123,026	+		Echvi_4271	0.57	-0.4
5,123,026	+		Echvi_4271	0.57	-0.6
5,123,027	-		Echvi_4271	0.57	-1.7
5,123,027	-		Echvi_4271	0.57	-0.9
5,123,028	+		Echvi_4271	0.57	-0.9
5,123,028	+		Echvi_4271	0.57	-0.7
5,123,028	+		Echvi_4271	0.57	+1.2
5,123,028	+		Echvi_4271	0.57	-0.7
5,123,029	-		Echvi_4271	0.58	-0.9
5,123,029	-		Echvi_4271	0.58	-0.6
5,123,029	-		Echvi_4271	0.58	+0.4
5,123,034	+		Echvi_4271	0.59	+0.7
5,123,035	-		Echvi_4271	0.59	-0.2
5,123,038	+		Echvi_4271	0.60	+0.1
5,123,080	+		Echvi_4271	0.72	-0.1
5,123,105	-		Echvi_4271	0.79	-0.2
5,123,112	-		Echvi_4271	0.81	-0.1
5,123,138	-		Echvi_4271	0.88	-0.2
5,123,154	-				-0.8
5,123,240	-		Echvi_4272	0.17	-0.9
5,123,244	+		Echvi_4272	0.18	-1.5
5,123,268	+		Echvi_4272	0.24	-0.9
5,123,274	+		Echvi_4272	0.26	-0.6
5,123,275	-		Echvi_4272	0.26	+0.9
5,123,305	-		Echvi_4272	0.34	+0.2
5,123,305	-		Echvi_4272	0.34	-2.9
5,123,305	-		Echvi_4272	0.34	+0.0
5,123,336	+		Echvi_4272	0.42	-0.1
5,123,371	-		Echvi_4272	0.51	+0.5
5,123,371	-		Echvi_4272	0.51	+0.9
5,123,437	+		Echvi_4272	0.68	-0.4
5,123,437	+		Echvi_4272	0.68	+0.4
5,123,438	-		Echvi_4272	0.68	-0.9
5,123,438	-		Echvi_4272	0.68	+1.8
5,123,449	-		Echvi_4272	0.71	-0.3
5,123,523	+				-0.1
5,123,523	+				-0.0
5,123,523	+				+0.2
5,123,524	-				+0.5
5,123,527	+				+0.5
5,123,528	-				-0.3
5,123,567	+				-1.0
5,123,686	+		Echvi_4273	0.26	-0.7
5,123,737	+		Echvi_4273	0.37	-1.2
5,123,737	+		Echvi_4273	0.37	-0.2
5,123,799	+		Echvi_4273	0.50	-2.3
5,123,799	+		Echvi_4273	0.50	-0.2
5,123,821	-		Echvi_4273	0.55	-1.1
5,123,827	+		Echvi_4273	0.56	-1.6
5,123,858	+		Echvi_4273	0.63	-0.7
5,123,859	-		Echvi_4273	0.63	+0.2
5,123,859	-		Echvi_4273	0.63	+0.4
5,123,898	+		Echvi_4273	0.71	-0.5
5,123,934	-		Echvi_4273	0.79	+0.1
5,123,934	-		Echvi_4273	0.79	-0.2
5,123,943	-		Echvi_4273	0.81	-1.7
5,123,944	+		Echvi_4273	0.81	-0.1
5,123,974	+		Echvi_4273	0.88	+0.1
5,123,975	-		Echvi_4273	0.88	+0.8
5,123,976	+		Echvi_4273	0.88	+0.3
5,123,976	+		Echvi_4273	0.88	-0.2
5,123,976	+		Echvi_4273	0.88	-0.5
5,123,977	-		Echvi_4273	0.88	-0.8
5,124,030	+				+1.1
5,124,030	+				-0.3
5,124,030	+				-0.6
5,124,031	-				-0.9
5,124,041	+				-1.7
5,124,065	-				-0.7
5,124,127	+		Echvi_4274	0.27	-0.9
5,124,161	+		Echvi_4274	0.38	-1.0