Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4046

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
4,850,795	-				+1.2
4,850,800	-				-1.8
4,851,596	-				+2.1
4,851,729	+				-0.2
4,851,729	+				-0.2
4,851,737	-				+0.2
4,851,794	+		Echvi_4046	0.10	-2.4
4,851,794	+		Echvi_4046	0.10	+0.2
4,851,851	+		Echvi_4046	0.15	-0.3
4,851,851	+		Echvi_4046	0.15	-0.6
4,851,851	+		Echvi_4046	0.15	+0.8
4,851,852	-		Echvi_4046	0.15	+0.6
4,851,852	-		Echvi_4046	0.15	-0.8
4,851,858	-		Echvi_4046	0.16	-2.1
4,851,866	+		Echvi_4046	0.16	-0.9
4,851,867	-		Echvi_4046	0.16	+0.1
4,851,877	+		Echvi_4046	0.17	-0.3
4,851,878	-		Echvi_4046	0.17	-0.3
4,851,878	-		Echvi_4046	0.17	-1.1
4,851,965	-		Echvi_4046	0.24	-0.4
4,851,980	+		Echvi_4046	0.25	+0.0
4,852,004	+		Echvi_4046	0.27	+2.1
4,852,030	+		Echvi_4046	0.29	-1.2
4,852,030	+		Echvi_4046	0.29	-0.5
4,852,031	-		Echvi_4046	0.29	-0.5
4,852,031	-		Echvi_4046	0.29	-0.7
4,852,031	-		Echvi_4046	0.29	+0.8
4,852,037	-		Echvi_4046	0.30	+0.4
4,852,070	+		Echvi_4046	0.33	+0.0
4,852,071	-		Echvi_4046	0.33	-1.4
4,852,071	-		Echvi_4046	0.33	-0.4
4,852,144	+		Echvi_4046	0.38	+0.1
4,852,145	-		Echvi_4046	0.39	+0.3
4,852,145	-		Echvi_4046	0.39	-2.3
4,852,145	-		Echvi_4046	0.39	-0.7
4,852,169	+		Echvi_4046	0.40	-0.5
4,852,306	+		Echvi_4046	0.51	-0.1
4,852,306	+		Echvi_4046	0.51	-0.0
4,852,306	+		Echvi_4046	0.51	+0.2
4,852,307	-		Echvi_4046	0.52	-0.6
4,852,307	-		Echvi_4046	0.52	+0.1
4,852,307	-		Echvi_4046	0.52	-2.1
4,852,310	-		Echvi_4046	0.52	-0.9
4,852,361	+		Echvi_4046	0.56	+0.8
4,852,362	-		Echvi_4046	0.56	-1.1
4,852,362	-		Echvi_4046	0.56	-0.6
4,852,362	-		Echvi_4046	0.56	+0.7
4,852,396	+		Echvi_4046	0.59	+0.9
4,852,403	+		Echvi_4046	0.59	-1.0
4,852,440	+		Echvi_4046	0.62	-0.8
4,852,443	-		Echvi_4046	0.62	-1.4
4,852,452	-		Echvi_4046	0.63	-1.2
4,852,589	+		Echvi_4046	0.74	-1.7
4,852,595	+		Echvi_4046	0.75	-1.5
4,852,595	+		Echvi_4046	0.75	+0.8
4,852,595	+		Echvi_4046	0.75	-0.5
4,852,743	-		Echvi_4046	0.87	-0.2
4,852,743	-		Echvi_4046	0.87	-0.4
4,852,807	+				+0.8
4,852,807	+				+0.6
4,852,808	-				-0.2
4,852,808	-				-0.4
4,852,808	-				+0.4
4,852,809	+				-0.2
4,852,810	-				-0.1
4,852,810	-				-1.1
4,852,810	-				-1.1
4,852,810	-				-0.2
4,852,810	-				-0.4
4,852,811	+				-0.6
4,852,812	-				+2.1
4,852,812	-				-0.5
4,852,812	-				+0.1
4,852,812	-				-1.3
4,852,867	-				-1.6
4,853,140	-		Echvi_4047	0.34	+0.0
4,853,169	-		Echvi_4047	0.49	+1.4
4,853,193	+		Echvi_4047	0.62	-0.3
4,853,194	-		Echvi_4047	0.62	+0.8
4,853,212	+		Echvi_4047	0.71	+0.5
4,853,295	+				+0.2
4,853,295	+				-0.3
4,853,318	+				-0.4
4,853,318	+				-0.7
4,853,384	-		Echvi_4048	0.19	-0.4
4,853,578	+				+0.1
4,853,593	+				-0.2
4,853,684	+		Echvi_4049	0.27	-0.7
4,853,685	-		Echvi_4049	0.27	+0.4
4,853,702	-		Echvi_4049	0.31	-0.8
4,853,726	+		Echvi_4049	0.36	-0.5
4,853,774	-		Echvi_4049	0.47	-0.4
4,853,774	-		Echvi_4049	0.47	+0.1
4,853,774	-		Echvi_4049	0.47	-0.1
4,853,794	+		Echvi_4049	0.51	-0.3
4,853,795	-		Echvi_4049	0.52	-0.9
4,853,805	+		Echvi_4049	0.54	+2.1
4,853,871	+		Echvi_4049	0.68	+0.9