Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3949

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
4,732,263	+		Echvi_3948	0.67	+0.2
4,732,263	+		Echvi_3948	0.67	+3.1
4,732,264	-		Echvi_3948	0.67	+0.2
4,732,264	-		Echvi_3948	0.67	-0.4
4,732,264	-		Echvi_3948	0.67	+4.9
4,732,267	+		Echvi_3948	0.67	+0.3
4,732,268	-		Echvi_3948	0.67	-0.7
4,732,312	+		Echvi_3948	0.70	-0.3
4,732,313	-		Echvi_3948	0.70	-1.4
4,732,313	-		Echvi_3948	0.70	+0.7
4,732,314	+		Echvi_3948	0.70	+0.3
4,732,326	-		Echvi_3948	0.71	-0.7
4,732,345	+		Echvi_3948	0.72	+0.1
4,732,533	+		Echvi_3948	0.83	-0.3
4,732,533	+		Echvi_3948	0.83	-0.1
4,732,534	-		Echvi_3948	0.83	+1.1
4,732,534	-		Echvi_3948	0.83	-0.6
4,732,534	-		Echvi_3948	0.83	-0.7
4,732,541	-		Echvi_3948	0.83	-0.1
4,732,758	+				+0.5
4,732,827	-				-0.3
4,732,870	+				+1.1
4,732,871	-				-1.3
4,732,871	-				-0.2
4,732,871	-				-0.4
4,732,873	+				+0.4
4,732,876	+				+0.3
4,732,876	+				+0.3
4,732,876	+				+0.4
4,732,877	-				-1.1
4,732,877	-				+0.3
4,732,877	-				+0.8
4,733,019	-				-0.6
4,733,046	+				-1.5
4,733,058	+				-0.7
4,733,059	-				-1.8
4,733,070	+				+0.5
4,733,083	+				-1.0
4,733,084	-				+0.0
4,733,085	+				+0.5
4,733,086	-				-0.2
4,733,086	-				+0.2
4,733,090	-				+1.1
4,733,134	+				-2.0
4,733,223	+				-0.6
4,733,224	-				+0.8
4,733,246	-				+0.2
4,733,247	+				+0.9
4,733,255	+				+0.0
4,733,256	-				-1.2
4,733,280	-				-0.5
4,733,290	-				-0.3
4,733,322	+		Echvi_3949	0.11	-0.9
4,733,322	+		Echvi_3949	0.11	-1.2
4,733,322	+		Echvi_3949	0.11	-0.5
4,733,323	-		Echvi_3949	0.11	+0.4
4,733,323	-		Echvi_3949	0.11	-0.7
4,733,323	-		Echvi_3949	0.11	+0.3
4,733,326	+		Echvi_3949	0.12	+1.1
4,733,327	-		Echvi_3949	0.12	-1.4
4,733,327	-		Echvi_3949	0.12	-1.2
4,733,377	+		Echvi_3949	0.18	-0.6
4,733,379	+		Echvi_3949	0.18	-0.9
4,733,379	+		Echvi_3949	0.18	+0.3
4,733,379	+		Echvi_3949	0.18	-0.1
4,733,379	+		Echvi_3949	0.18	-1.1
4,733,380	-		Echvi_3949	0.18	+0.1
4,733,404	+		Echvi_3949	0.21	+0.3
4,733,408	-		Echvi_3949	0.21	-0.9
4,733,425	-		Echvi_3949	0.23	+0.2
4,733,428	-		Echvi_3949	0.23	-0.6
4,733,436	+		Echvi_3949	0.24	+0.7
4,733,437	-		Echvi_3949	0.24	+0.4
4,733,521	+		Echvi_3949	0.34	-0.9
4,733,641	+		Echvi_3949	0.48	+0.1
4,733,660	+		Echvi_3949	0.50	-0.4
4,733,660	+		Echvi_3949	0.50	+0.8
4,733,688	+		Echvi_3949	0.53	-1.1
4,733,688	+		Echvi_3949	0.53	+0.7
4,733,688	+		Echvi_3949	0.53	+1.8
4,733,689	-		Echvi_3949	0.53	+0.9
4,733,715	-		Echvi_3949	0.56	+0.1
4,733,737	+		Echvi_3949	0.59	-0.3
4,733,771	+		Echvi_3949	0.62	-2.7
4,733,771	+		Echvi_3949	0.62	+0.4
4,733,771	+		Echvi_3949	0.62	-1.0
4,733,772	-		Echvi_3949	0.63	+0.9
4,733,772	-		Echvi_3949	0.63	-0.2
4,733,772	-		Echvi_3949	0.63	-0.4
4,733,773	+		Echvi_3949	0.63	+0.0
4,733,775	+		Echvi_3949	0.63	-0.7
4,733,775	+		Echvi_3949	0.63	-1.0
4,733,775	+		Echvi_3949	0.63	-1.2
4,733,776	-		Echvi_3949	0.63	-0.9
4,733,776	-		Echvi_3949	0.63	+0.0
4,733,776	-		Echvi_3949	0.63	-0.4
4,733,776	-		Echvi_3949	0.63	+0.8
4,733,776	-		Echvi_3949	0.63	-0.3
4,733,776	-		Echvi_3949	0.63	+0.2
4,733,776	-		Echvi_3949	0.63	-0.6
4,733,776	-		Echvi_3949	0.63	-2.0
4,733,776	-		Echvi_3949	0.63	-0.0
4,733,791	-		Echvi_3949	0.65	-0.1
4,733,810	-		Echvi_3949	0.67	-0.1
4,733,812	+		Echvi_3949	0.67	+0.6
4,733,812	+		Echvi_3949	0.67	-1.1
4,733,812	+		Echvi_3949	0.67	-0.3
4,733,813	-		Echvi_3949	0.67	-0.2
4,733,813	-		Echvi_3949	0.67	-0.7
4,733,813	-		Echvi_3949	0.67	-0.0
4,733,813	-		Echvi_3949	0.67	-0.1
4,733,831	-		Echvi_3949	0.69	-0.5
4,733,831	-		Echvi_3949	0.69	-0.9
4,733,841	-		Echvi_3949	0.70	-0.7
4,733,854	+		Echvi_3949	0.72	+0.0
4,733,929	+		Echvi_3949	0.80	-0.6
4,733,931	+		Echvi_3949	0.81	-0.2
4,733,932	-		Echvi_3949	0.81	-0.9
4,733,932	-		Echvi_3949	0.81	+0.1
4,733,932	-		Echvi_3949	0.81	+0.5
4,733,932	-		Echvi_3949	0.81	-0.0
4,733,932	-		Echvi_3949	0.81	-0.5
4,733,932	-				+2.1
4,733,932	-		Echvi_3949	0.81	-0.5
4,733,960	+		Echvi_3949	0.84	-0.8
4,733,960	+		Echvi_3949	0.84	-1.8
4,733,970	-		Echvi_3949	0.85	-0.2
4,733,983	+		Echvi_3949	0.87	-0.5
4,734,042	-				-0.1
4,734,042	-				+0.1
4,734,079	-				-0.5
4,734,079	-				-1.3
4,734,117	+				-0.3
4,734,143	+				+2.1
4,734,155	+				+0.5
4,734,155	+				+1.8
4,734,156	-				+0.3
4,734,171	-				+0.3
4,734,171	-				+0.6
4,734,253	+				-0.4
4,734,253	+				-1.1
4,734,253	+				-0.2
4,734,253	+				-0.4
4,734,253	+				-0.5
4,734,254	-				-0.6
4,734,254	-				+0.1
4,734,372	+				+0.6
4,734,373	-				+1.4
4,734,386	+				+1.5
4,734,436	+		Echvi_3950	0.13	+0.5
4,734,436	+		Echvi_3950	0.13	+0.6
4,734,437	-		Echvi_3950	0.13	-0.1
4,734,517	+		Echvi_3950	0.20	-0.3
4,734,518	-		Echvi_3950	0.20	-0.2
4,734,520	+		Echvi_3950	0.20	-0.2
4,734,520	+		Echvi_3950	0.20	+0.1
4,734,521	-		Echvi_3950	0.20	+0.7
4,734,521	-		Echvi_3950	0.20	+0.1
4,734,521	-		Echvi_3950	0.20	-0.2
4,734,529	-		Echvi_3950	0.21	-0.2
4,734,560	+		Echvi_3950	0.23	+0.1
4,734,565	-		Echvi_3950	0.24	-0.0
4,734,656	+		Echvi_3950	0.31	-0.2
4,734,680	+		Echvi_3950	0.33	-0.6
4,734,699	-		Echvi_3950	0.34	-0.5
4,734,700	+		Echvi_3950	0.34	-2.1
4,734,825	+		Echvi_3950	0.44	-0.8
4,734,826	-		Echvi_3950	0.44	+0.1
4,734,866	+		Echvi_3950	0.48	+1.2
4,734,866	+		Echvi_3950	0.48	-0.3
4,734,867	-		Echvi_3950	0.48	-1.7
4,734,867	-		Echvi_3950	0.48	+0.7
4,734,867	-		Echvi_3950	0.48	-0.5
4,734,957	+		Echvi_3950	0.55	-0.9
4,734,999	-		Echvi_3950	0.58	+0.0
4,735,004	+		Echvi_3950	0.59	+0.3