Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3604

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
4,274,545	+				+0.5
4,274,581	+				+0.7
4,274,582	-				-1.9
4,274,582	-				-1.7
4,274,584	-				-1.8
4,274,637	+				-0.0
4,274,638	-				+0.3
4,274,638	-				-0.4
4,274,650	+				+2.1
4,274,650	+				-1.6
4,274,650	+				+0.3
4,274,651	-				-0.2
4,274,653	+				-1.4
4,274,665	+				-1.3
4,274,665	+				-1.1
4,274,666	-				-0.4
4,274,666	-				-1.4
4,274,666	-				-1.3
4,274,666	-				+2.1
4,274,668	-				+1.0
4,274,672	+				-1.0
4,274,672	+				-2.1
4,274,673	-				+1.1
4,274,673	-				-0.2
4,274,695	-				-1.0
4,274,695	-				-1.9
4,274,695	-				-0.2
4,274,695	-				-0.8
4,274,708	-				-0.4
4,274,764	-		Echvi_3602	0.15	-0.2
4,274,764	-		Echvi_3602	0.15	-1.6
4,274,780	+		Echvi_3602	0.17	-1.8
4,274,786	-		Echvi_3602	0.18	-1.2
4,274,786	-		Echvi_3602	0.18	-1.8
4,274,786	-		Echvi_3602	0.18	+0.3
4,274,792	+		Echvi_3602	0.19	-0.7
4,274,842	-		Echvi_3602	0.28	-1.9
4,274,852	+		Echvi_3602	0.30	-1.7
4,274,853	-		Echvi_3602	0.30	-0.6
4,274,880	+		Echvi_3602	0.35	+0.1
4,274,894	-		Echvi_3602	0.37	+0.1
4,274,989	-		Echvi_3602	0.53	-0.9
4,275,022	+		Echvi_3602	0.59	-0.0
4,275,039	-		Echvi_3602	0.62	-1.4
4,275,052	+		Echvi_3602	0.64	-0.6
4,275,151	+		Echvi_3602	0.81	-1.0
4,275,174	+		Echvi_3602	0.85	-1.8
4,275,233	-				+0.5
4,275,233	-				+0.1
4,275,244	-				-0.6
4,275,259	-				-0.2
4,275,259	-				+0.3
4,275,264	+				-0.6
4,275,279	-				+0.6
4,275,279	-				-0.3
4,275,291	-				-0.3
4,275,294	-				+0.8
4,275,300	+				-1.8
4,275,301	-				-0.5
4,275,327	+				+0.7
4,275,430	+		Echvi_3603	0.55	-0.8
4,275,431	-		Echvi_3603	0.55	-1.6
4,275,444	+		Echvi_3603	0.62	-0.6
4,275,497	+		Echvi_3603	0.88	-0.2
4,275,498	-		Echvi_3603	0.88	-2.6
4,275,502	-				-0.5
4,275,502	-				+0.8
4,275,512	+				+0.3
4,275,512	+				+1.1
4,275,513	-				-0.2
4,275,513	-				-1.9
4,275,513	-				+0.3
4,275,530	-				+1.3
4,275,563	+				-1.1
4,275,607	+				-0.2
4,275,756	+		Echvi_3604	0.21	-0.3
4,275,756	+		Echvi_3604	0.21	-0.2
4,275,817	+		Echvi_3604	0.27	+1.8
4,275,896	+		Echvi_3604	0.34	-1.3
4,276,030	+		Echvi_3604	0.47	-0.4
4,276,065	+		Echvi_3604	0.50	+1.7
4,276,065	+		Echvi_3604	0.50	-0.8
4,276,186	+		Echvi_3604	0.62	-1.6
4,276,186	+		Echvi_3604	0.62	+0.1
4,276,186	+		Echvi_3604	0.62	-0.3
4,276,196	+		Echvi_3604	0.63	-0.7
4,276,257	+		Echvi_3604	0.68	-2.8
4,276,257	+		Echvi_3604	0.68	+1.2
4,276,351	+		Echvi_3604	0.77	+0.6
4,276,386	+		Echvi_3604	0.81	+0.2
4,276,393	+		Echvi_3604	0.81	-0.0
4,276,428	+		Echvi_3604	0.85	+0.8
4,276,530	+				-0.1
4,276,575	+				-0.8
4,276,601	+				-0.8
4,276,629	+				-0.5
4,276,659	+				-0.1
4,276,695	+				-1.2
4,276,722	+				-0.9
4,276,722	+				-0.7
4,276,722	+				-0.5
4,276,775	+		Echvi_3605	0.18	+0.4
4,276,775	+		Echvi_3605	0.18	-1.0
4,276,775	+		Echvi_3605	0.18	-2.1
4,276,779	+		Echvi_3605	0.19	-0.1
4,276,779	+		Echvi_3605	0.19	+0.7
4,276,916	+		Echvi_3605	0.44	-0.2
4,276,950	+		Echvi_3605	0.50	-0.4
4,277,025	+		Echvi_3605	0.64	-0.7
4,277,026	-		Echvi_3605	0.64	-1.3
4,277,061	+		Echvi_3605	0.71	-0.0
4,277,061	+		Echvi_3605	0.71	+0.4
4,277,062	-		Echvi_3605	0.71	-1.0
4,277,062	-		Echvi_3605	0.71	-0.7
4,277,133	+		Echvi_3605	0.84	-0.7
4,277,134	-		Echvi_3605	0.84	-0.4
4,277,155	-		Echvi_3605	0.88	+0.7
4,277,173	-				-1.4
4,277,180	-				+2.7
4,277,180	-				+0.3
4,277,201	-				-1.1
4,277,238	+				-0.5
4,277,250	+				-0.1
4,277,288	+				-0.3
4,277,309	+				-0.4
4,277,309	+				-1.2
4,277,365	+				-0.7
4,277,365	+				+0.4
4,277,422	+				-0.9
4,277,422	+				+0.3
4,277,493	+				-2.0
4,277,534	+		Echvi_3606	0.11	+0.0
4,277,554	+		Echvi_3606	0.12	-0.0