Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3550

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
4,208,025	-		Echvi_3549	0.20	+0.1
4,208,027	-		Echvi_3549	0.20	+1.4
4,208,027	-		Echvi_3549	0.20	+1.7
4,208,067	-		Echvi_3549	0.26	+2.9
4,208,070	-		Echvi_3549	0.26	+3.8
4,208,186	-		Echvi_3549	0.44	+1.2
4,208,240	+		Echvi_3549	0.52	-0.5
4,208,241	-		Echvi_3549	0.52	-0.6
4,208,283	-		Echvi_3549	0.58	-1.2
4,208,381	-		Echvi_3549	0.73	-0.2
4,208,381	-		Echvi_3549	0.73	+0.5
4,208,381	-		Echvi_3549	0.73	+0.5
4,208,397	-		Echvi_3549	0.75	+0.2
4,208,424	+		Echvi_3549	0.79	+0.7
4,208,425	-		Echvi_3549	0.80	-0.2
4,208,425	-		Echvi_3549	0.80	-0.9
4,208,484	+		Echvi_3549	0.88	-1.5
4,208,484	+		Echvi_3549	0.88	-1.1
4,208,484	+		Echvi_3549	0.88	+0.0
4,208,485	-		Echvi_3549	0.88	+1.0
4,208,489	+		Echvi_3549	0.89	-1.5
4,208,490	-		Echvi_3549	0.89	-0.5
4,208,490	-		Echvi_3549	0.89	-0.3
4,208,490	-		Echvi_3549	0.89	-1.4
4,208,509	-				-0.5
4,208,516	-				-0.1
4,208,531	-				+0.5
4,208,679	-				+1.5
4,208,889	+				-0.5
4,208,890	-				-1.1
4,208,890	-				+0.8
4,208,892	-				+0.0
4,208,998	+				+0.1
4,208,998	+				-1.7
4,208,999	-				-0.2
4,209,033	+				+2.1
4,209,033	+				+0.6
4,209,039	+				+0.7
4,209,040	-				+1.3
4,209,081	+				-0.6
4,209,162	-		Echvi_3550	0.14	-0.5
4,209,162	-		Echvi_3550	0.14	+0.7
4,209,183	+		Echvi_3550	0.16	-1.1
4,209,183	+		Echvi_3550	0.16	+0.5
4,209,184	-		Echvi_3550	0.16	+0.3
4,209,184	-		Echvi_3550	0.16	+0.7
4,209,184	-		Echvi_3550	0.16	+0.9
4,209,227	+		Echvi_3550	0.19	+0.1
4,209,228	-		Echvi_3550	0.20	-0.3
4,209,267	-		Echvi_3550	0.23	-0.2
4,209,272	+		Echvi_3550	0.24	+0.3
4,209,273	-		Echvi_3550	0.24	+0.4
4,209,275	+		Echvi_3550	0.24	+0.3
4,209,276	-		Echvi_3550	0.24	-0.5
4,209,276	-		Echvi_3550	0.24	-0.2
4,209,293	-		Echvi_3550	0.25	+0.2
4,209,314	+		Echvi_3550	0.27	+1.4
4,209,315	-		Echvi_3550	0.27	+1.0
4,209,364	-		Echvi_3550	0.32	-0.2
4,209,375	-		Echvi_3550	0.33	-0.1
4,209,396	+		Echvi_3550	0.35	-0.4
4,209,428	+		Echvi_3550	0.37	+0.5
4,209,429	-		Echvi_3550	0.38	+0.9
4,209,444	+		Echvi_3550	0.39	-0.1
4,209,445	-		Echvi_3550	0.39	+1.1
4,209,445	-		Echvi_3550	0.39	+0.3
4,209,485	+		Echvi_3550	0.43	-0.2
4,209,486	-		Echvi_3550	0.43	-0.0
4,209,486	-		Echvi_3550	0.43	+1.1
4,209,514	+		Echvi_3550	0.45	+0.7
4,209,600	-		Echvi_3550	0.53	+0.5
4,209,602	-		Echvi_3550	0.53	+1.8
4,209,602	-		Echvi_3550	0.53	+0.9
4,209,602	-		Echvi_3550	0.53	-0.6
4,209,623	-		Echvi_3550	0.55	-0.9
4,209,698	+		Echvi_3550	0.62	+1.4
4,209,699	-		Echvi_3550	0.62	+0.4
4,209,718	+		Echvi_3550	0.63	+0.8
4,209,718	+				+1.1
4,209,718	+		Echvi_3550	0.63	+0.4
4,209,719	-		Echvi_3550	0.63	+1.3
4,209,719	-		Echvi_3550	0.63	-0.7
4,209,793	-		Echvi_3550	0.70	-1.1
4,209,799	+		Echvi_3550	0.71	+0.7
4,209,799	+		Echvi_3550	0.71	-0.2
4,209,800	-		Echvi_3550	0.71	-0.2
4,209,800	-		Echvi_3550	0.71	+0.2
4,209,800	-		Echvi_3550	0.71	+1.6
4,209,800	-		Echvi_3550	0.71	+1.0
4,209,809	+		Echvi_3550	0.71	-0.5
4,209,810	-		Echvi_3550	0.72	+1.1
4,209,810	-		Echvi_3550	0.72	-0.9
4,209,827	+		Echvi_3550	0.73	-0.5
4,209,857	-		Echvi_3550	0.76	+1.1
4,209,899	+		Echvi_3550	0.80	+0.4
4,210,020	-				+0.5
4,210,032	-				-1.2
4,210,032	-				-0.8
4,210,064	-				-0.4
4,210,074	-				-0.8
4,210,162	+				-0.7
4,210,165	+				+0.6
4,210,165	+				+2.5
4,210,170	-				-2.0
4,210,971	+				-0.7
4,210,974	+				-1.1
4,210,975	-				+0.2
4,210,975	-				+0.1
4,211,007	+				-0.3
4,211,008	-				+0.5
4,211,022	-				+0.7
4,211,041	+				-1.3
4,211,072	+				-1.7
4,211,082	+				+0.0
4,211,082	+				-0.3