Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3482

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
4,121,577	+				+0.3
4,121,579	+				+1.0
4,121,592	-				+0.0
4,121,613	+				-0.1
4,121,613	+				-0.0
4,121,675	+				+2.2
4,121,988	+		Echvi_3481	0.41	-0.5
4,122,279	+		Echvi_3481	0.72	-0.5
4,122,312	+		Echvi_3481	0.75	+1.3
4,122,363	+		Echvi_3481	0.81	+0.7
4,122,415	+		Echvi_3481	0.86	-0.2
4,122,417	+		Echvi_3481	0.86	+0.6
4,122,417	+		Echvi_3481	0.86	+0.7
4,122,418	-				+2.1
4,122,442	+		Echvi_3481	0.89	+1.2
4,122,456	-				+1.5
4,122,528	+				+2.9
4,122,539	+				+1.8
4,122,539	+				+0.5
4,122,540	-				+2.1
4,122,560	+				+1.1
4,123,859	+				-2.1
4,123,961	+		Echvi_3483	0.17	-0.6
4,123,962	-		Echvi_3483	0.17	-0.1
4,123,982	-		Echvi_3483	0.20	+1.5
4,124,035	-		Echvi_3483	0.28	-0.1
4,124,256	-		Echvi_3483	0.62	+0.1
4,124,271	+		Echvi_3483	0.64	+0.3
4,124,271	+		Echvi_3483	0.64	+1.6
4,124,271	+		Echvi_3483	0.64	-1.7
4,124,272	-		Echvi_3483	0.64	-0.3
4,124,337	+		Echvi_3483	0.74	-0.8
4,124,337	+		Echvi_3483	0.74	-1.0
4,124,339	+		Echvi_3483	0.74	+0.8
4,124,339	+		Echvi_3483	0.74	-1.2
4,124,339	+		Echvi_3483	0.74	+0.3
4,124,339	+		Echvi_3483	0.74	+0.1
4,124,340	-		Echvi_3483	0.75	+0.4
4,124,340	-		Echvi_3483	0.75	-1.9
4,124,340	-		Echvi_3483	0.75	+0.3
4,124,408	+		Echvi_3483	0.85	+0.2
4,124,502	-				-0.1
4,124,522	-				+0.3
4,124,578	+				+0.6
4,124,579	-				-0.6
4,124,625	+				+0.1
4,124,626	-				-0.7
4,124,626	-				-1.0
4,124,632	+				-0.9
4,124,727	+		Echvi_3484	0.16	+0.7
4,124,744	+		Echvi_3484	0.19	+2.1
4,124,746	+		Echvi_3484	0.19	+0.6