Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3352

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
3,956,716	-		Echvi_3351	0.81	+2.5
3,956,745	+		Echvi_3351	0.83	+1.1
3,956,745	+		Echvi_3351	0.83	+1.0
3,956,746	-		Echvi_3351	0.83	+0.7
3,956,781	-		Echvi_3351	0.85	+0.6
3,956,828	-		Echvi_3351	0.88	+1.8
3,956,849	+		Echvi_3351	0.89	+0.9
3,956,849	+		Echvi_3351	0.89	+1.2
3,956,849	+		Echvi_3351	0.89	+0.5
3,956,849	+		Echvi_3351	0.89	+0.2
3,956,849	+		Echvi_3351	0.89	+0.9
3,956,850	-		Echvi_3351	0.89	+2.0
3,956,850	-		Echvi_3351	0.89	+0.9
3,956,850	-		Echvi_3351	0.89	-0.0
3,956,850	-		Echvi_3351	0.89	-0.4
3,956,851	+		Echvi_3351	0.89	+2.5
3,956,864	-				+0.7
3,956,934	+				+3.6
3,956,934	+				+1.6
3,956,934	+				+0.8
3,956,935	-				-0.2
3,956,957	+				+1.1
3,956,958	-				+1.1
3,956,964	-				+0.3
3,957,008	-				-0.0
3,957,008	-				+1.8
3,957,008	-				+0.6
3,957,008	-				+2.5
3,957,119	-				-2.4
3,957,119	-				-0.3
3,957,147	-				-0.6
3,957,150	+				+0.2
3,957,150	+				-1.2
3,957,150	+				-0.1
3,957,151	-				-0.7
3,957,225	+				+1.6
3,957,225	+				+0.9
3,957,226	-				-0.1
3,957,280	+				-0.0
3,957,297	+				-0.5
3,957,297	+				-1.8
3,957,297	+				+0.8
3,957,297	+				-0.6
3,957,298	-				+1.6
3,957,315	-				-0.9
3,957,323	+				-0.7
3,957,323	+				+0.1
3,957,324	-				-1.7
3,957,324	-				-3.1
3,957,349	+				+0.3
3,957,350	-				+0.1
3,957,350	-				-0.8
3,957,350	-				+0.5
3,957,363	-				-1.1
3,957,385	-				-0.5
3,957,434	+				-1.1
3,957,435	-				-0.7
3,957,435	-				+1.4
3,957,435	-				+1.3
3,957,436	+				-0.2
3,957,436	+				-0.1
3,957,437	-				-1.8
3,957,444	+				-0.8
3,957,445	-				-0.3
3,957,533	+				+1.8
3,957,534	-				+0.5
3,957,534	-				+1.3
3,957,598	+		Echvi_3352	0.13	+0.5
3,957,640	+		Echvi_3352	0.16	-0.7
3,957,640	+		Echvi_3352	0.16	-1.2
3,957,716	-		Echvi_3352	0.22	-1.1
3,957,743	-		Echvi_3352	0.24	+2.8
3,957,766	-		Echvi_3352	0.26	+2.1
3,957,767	+		Echvi_3352	0.26	+1.9
3,957,767	+		Echvi_3352	0.26	+0.4
3,957,767	+		Echvi_3352	0.26	-0.2
3,957,768	-		Echvi_3352	0.26	+0.7
3,957,768	-		Echvi_3352	0.26	+1.0
3,957,768	-		Echvi_3352	0.26	+1.9
3,957,773	+		Echvi_3352	0.27	+1.0
3,957,774	-		Echvi_3352	0.27	+0.0
3,957,825	+		Echvi_3352	0.31	+1.0
3,957,868	+		Echvi_3352	0.34	+0.2
3,957,884	+		Echvi_3352	0.36	-1.2
3,957,884	+		Echvi_3352	0.36	+1.1
3,957,884	+		Echvi_3352	0.36	-0.0
3,957,926	+		Echvi_3352	0.39	+1.3
3,957,927	-		Echvi_3352	0.39	+1.0
3,957,927	-		Echvi_3352	0.39	-0.2
3,957,937	-		Echvi_3352	0.40	+0.3
3,957,957	+		Echvi_3352	0.41	-0.7
3,957,957	+		Echvi_3352	0.41	-0.7
3,957,957	+		Echvi_3352	0.41	-3.3
3,957,991	+		Echvi_3352	0.44	+2.0
3,958,033	+		Echvi_3352	0.48	-0.3
3,958,033	+		Echvi_3352	0.48	-0.6
3,958,033	+		Echvi_3352	0.48	-1.6
3,958,035	+		Echvi_3352	0.48	+0.5
3,958,036	-		Echvi_3352	0.48	+0.7
3,958,234	+		Echvi_3352	0.64	+0.6
3,958,247	-		Echvi_3352	0.65	-0.1
3,958,399	+		Echvi_3352	0.77	+0.2
3,958,400	-		Echvi_3352	0.77	+3.1
3,958,400	-		Echvi_3352	0.77	-0.5
3,958,400	-		Echvi_3352	0.77	+1.8
3,958,435	-		Echvi_3352	0.80	-0.9
3,958,435	-		Echvi_3352	0.80	+0.4
3,958,443	-		Echvi_3352	0.81	+1.1
3,958,452	+		Echvi_3352	0.81	+0.3
3,958,452	+		Echvi_3352	0.81	-0.0
3,958,452	+		Echvi_3352	0.81	+1.5
3,958,452	+		Echvi_3352	0.81	+3.7
3,958,452	+		Echvi_3352	0.81	-0.4
3,958,452	+		Echvi_3352	0.81	-0.1
3,958,453	-		Echvi_3352	0.82	+1.0
3,958,515	-		Echvi_3352	0.87	-0.3
3,958,520	+		Echvi_3352	0.87	-0.2
3,958,528	-		Echvi_3352	0.88	+0.5
3,958,528	-		Echvi_3352	0.88	+1.1
3,958,561	+				+0.6
3,958,562	-				+1.1
3,958,603	-				+0.3
3,958,654	+				+0.4
3,958,665	+				+0.6
3,958,772	-				+0.3
3,958,964	+				+1.3
3,958,965	-				-0.4
3,958,996	-				-0.5
3,959,023	-				-0.5
3,959,023	-				+0.3
3,959,026	-				+0.7
3,959,070	-				-0.0
3,959,130	+				-0.2
3,959,130	+				+0.5
3,959,131	-				-0.7
3,959,187	-				-0.1
3,959,224	-				-0.6
3,959,247	+				-0.0
3,959,248	-				-2.0
3,959,285	+				+2.4
3,959,327	+				-0.9
3,959,328	-				-0.6
3,959,328	-				+0.7
3,959,328	-				+2.4
3,959,328	-				+0.5
3,959,392	+				+0.1
3,959,392	+				+0.5
3,959,392	+				-0.1
3,959,392	+				-0.1
3,959,392	+				+0.8
3,959,393	-				+0.9
3,959,393	-				-0.8
3,959,393	-				-0.9
3,959,393	-				+0.8
3,959,423	-				-1.1
3,959,423	-				-0.0
3,959,423	-				+0.3
3,959,424	+				-0.1
3,959,454	+				+0.3
3,959,454	+				+0.2
3,959,455	-				-0.9
3,959,456	+				+0.3
3,959,456	+				+0.3
3,959,457	-				+0.3
3,959,496	-				+0.1
3,959,631	+		Echvi_3353	0.14	-0.7
3,959,666	+		Echvi_3353	0.15	-0.0