Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3229

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
3,826,765	+		Echvi_3228	0.66	+0.7
3,826,773	+		Echvi_3228	0.67	+0.9
3,826,796	-		Echvi_3228	0.70	-0.6
3,826,796	-		Echvi_3228	0.70	-0.9
3,826,806	+		Echvi_3228	0.71	+1.1
3,826,806	+		Echvi_3228	0.71	-1.1
3,826,919	+		Echvi_3228	0.86	-0.9
3,826,919	+		Echvi_3228	0.86	+0.1
3,826,919	+		Echvi_3228	0.86	+0.2
3,826,920	-		Echvi_3228	0.86	-0.4
3,826,926	+		Echvi_3228	0.87	+0.3
3,826,927	-		Echvi_3228	0.87	-0.4
3,826,955	-				+1.1
3,827,115	+				-0.9
3,827,116	-				-0.1
3,827,119	+				-0.1
3,827,119	+				-1.4
3,827,141	-				-1.1
3,827,183	-				+1.1
3,827,251	+				-0.7
3,827,251	+				-0.0
3,827,252	-				+0.1
3,827,253	+				+1.4
3,827,253	+				+0.5
3,827,253	+				-1.8
3,827,253	+				+0.3
3,827,253	+				-1.1
3,827,254	-				-0.7
3,827,254	-				+0.1
3,827,407	+				+2.4
3,827,407	+				-0.4
3,827,408	-				+1.1
3,827,408	-				-1.2
3,827,408	-				+0.7
3,827,423	-				-1.4
3,827,596	+				+0.4
3,827,596	+				+0.2
3,827,596	+				+0.3
3,827,597	-				+0.4
3,827,598	+				+0.2
3,827,599	-				+0.6
3,827,599	-				+0.4
3,827,603	-				-0.8
3,827,603	-				-0.6
3,827,746	+				-0.5
3,827,750	+				+0.1
3,827,751	-				+0.7
3,827,760	+				-1.1
3,827,921	-		Echvi_3229	0.36	+0.2
3,828,011	-		Echvi_3229	0.56	-0.2
3,828,039	-		Echvi_3229	0.63	+0.8
3,828,041	-		Echvi_3229	0.63	-0.0
3,828,041	-		Echvi_3229	0.63	+0.7
3,828,063	-		Echvi_3229	0.68	+1.2
3,828,095	+		Echvi_3229	0.75	-0.1
3,828,096	-		Echvi_3229	0.76	+2.1
3,828,096	-		Echvi_3229	0.76	+0.0
3,828,104	-		Echvi_3229	0.77	+1.1
3,828,236	+				+0.9
3,828,236	+				+0.5
3,828,254	-				+0.7
3,828,254	-				-0.8
3,828,303	+				-1.1
3,828,303	+				+0.9
3,828,368	-		Echvi_3230	0.13	-0.5
3,828,368	-		Echvi_3230	0.13	-1.0
3,828,475	+		Echvi_3230	0.21	-0.7
3,828,475	+		Echvi_3230	0.21	-0.6
3,828,475	+		Echvi_3230	0.21	+0.3
3,828,477	+		Echvi_3230	0.21	+0.8
3,828,478	-		Echvi_3230	0.21	-2.3
3,828,478	-		Echvi_3230	0.21	-0.5
3,828,478	-		Echvi_3230	0.21	-0.5
3,828,494	-		Echvi_3230	0.22	-0.4
3,828,494	-		Echvi_3230	0.22	-1.0
3,828,515	+		Echvi_3230	0.24	-0.5
3,828,516	-		Echvi_3230	0.24	-0.9
3,828,516	-		Echvi_3230	0.24	+0.1
3,828,626	+		Echvi_3230	0.33	+1.5
3,828,626	+		Echvi_3230	0.33	-1.8
3,828,650	-		Echvi_3230	0.34	+1.4
3,828,715	+		Echvi_3230	0.40	+0.1
3,828,729	+		Echvi_3230	0.41	+0.6
3,828,730	-		Echvi_3230	0.41	-0.2
3,828,732	-		Echvi_3230	0.41	-0.1
3,828,732	-		Echvi_3230	0.41	-0.3
3,828,732	-		Echvi_3230	0.41	-1.1
3,828,772	+		Echvi_3230	0.44	-0.6
3,828,776	-		Echvi_3230	0.44	-0.8
3,828,825	+		Echvi_3230	0.48	+0.1
3,828,827	+		Echvi_3230	0.48	-0.4
3,828,827	+		Echvi_3230	0.48	-1.3
3,828,827	+		Echvi_3230	0.48	-0.9
3,828,827	+		Echvi_3230	0.48	+1.7
3,828,828	-		Echvi_3230	0.48	+0.5
3,828,828	-		Echvi_3230	0.48	-0.9
3,828,828	-		Echvi_3230	0.48	-1.8
3,828,831	+		Echvi_3230	0.49	+0.4
3,828,831	+		Echvi_3230	0.49	+1.1
3,828,832	-		Echvi_3230	0.49	+1.1
3,828,832	-		Echvi_3230	0.49	+0.2
3,828,878	+		Echvi_3230	0.52	-0.9
3,828,884	-		Echvi_3230	0.53	+0.4
3,828,884	-		Echvi_3230	0.53	+0.5
3,828,894	-		Echvi_3230	0.53	-0.8
3,828,894	-		Echvi_3230	0.53	+0.3
3,829,002	-		Echvi_3230	0.62	+0.4
3,829,028	+		Echvi_3230	0.64	-0.3
3,829,112	+		Echvi_3230	0.70	-0.4
3,829,113	-		Echvi_3230	0.70	+0.1
3,829,141	-		Echvi_3230	0.73	+0.8
3,829,200	-		Echvi_3230	0.77	+1.8