Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3219

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
3,819,383	+		Echvi_3217	0.70	-0.5
3,819,383	+		Echvi_3217	0.70	-1.6
3,819,383	+		Echvi_3217	0.70	+0.1
3,819,383	+		Echvi_3217	0.70	+0.0
3,819,383	+		Echvi_3217	0.70	-0.2
3,819,383	+		Echvi_3217	0.70	+0.2
3,819,383	+		Echvi_3217	0.70	-0.9
3,819,384	-		Echvi_3217	0.70	+0.9
3,819,384	-		Echvi_3217	0.70	-1.8
3,819,395	-		Echvi_3217	0.71	-0.9
3,819,418	-		Echvi_3217	0.73	+0.2
3,819,429	-		Echvi_3217	0.74	+0.1
3,819,429	-		Echvi_3217	0.74	-0.7
3,819,449	-		Echvi_3217	0.75	+0.3
3,819,449	-		Echvi_3217	0.75	+0.1
3,819,458	+		Echvi_3217	0.76	+0.3
3,819,518	-		Echvi_3217	0.81	+0.3
3,819,612	+		Echvi_3217	0.88	-0.5
3,819,613	-		Echvi_3217	0.88	+0.8
3,819,634	+		Echvi_3217	0.90	-1.1
3,819,748	-				-2.6
3,819,836	+		Echvi_3218	0.10	+1.5
3,819,836	+		Echvi_3218	0.10	-0.2
3,819,836	+		Echvi_3218	0.10	-1.2
3,819,836	+		Echvi_3218	0.10	-0.3
3,819,848	+		Echvi_3218	0.12	+0.6
3,819,848	+		Echvi_3218	0.12	-0.1
3,819,938	+		Echvi_3218	0.28	+2.5
3,819,938	+		Echvi_3218	0.28	-0.9
3,820,042	+		Echvi_3218	0.46	+0.7
3,820,043	-		Echvi_3218	0.46	-0.4
3,820,069	+		Echvi_3218	0.51	-0.6
3,820,071	+		Echvi_3218	0.51	-0.2
3,820,072	-		Echvi_3218	0.51	+1.1
3,820,115	+		Echvi_3218	0.59	-1.5
3,820,174	+		Echvi_3218	0.69	-0.3
3,820,174	+		Echvi_3218	0.69	-0.6
3,820,175	-		Echvi_3218	0.69	+0.5
3,820,221	-		Echvi_3218	0.77	-0.4
3,820,269	+		Echvi_3218	0.85	-2.0
3,820,326	+				-1.2
3,820,326	+				-1.4
3,820,358	+				-0.3
3,820,358	+				+0.4
3,820,358	+				+0.2
3,820,358	+				-0.2
3,820,358	+				-0.1
3,820,399	+				+2.0
3,820,399	+				-0.2
3,820,399	+				+0.2
3,820,399	+				+0.2
3,820,399	+				+0.8
3,820,400	-				-0.1
3,820,497	+		Echvi_3219	0.13	+0.3
3,820,588	-		Echvi_3219	0.22	-0.9
3,820,631	-		Echvi_3219	0.26	+0.7
3,820,753	-				+0.5
3,820,864	+		Echvi_3219	0.48	+1.0
3,820,864	+		Echvi_3219	0.48	+0.6
3,820,865	-		Echvi_3219	0.48	-2.3
3,820,865	-		Echvi_3219	0.48	+0.0
3,820,912	+		Echvi_3219	0.53	+0.5
3,820,921	-		Echvi_3219	0.54	-0.4
3,820,922	+		Echvi_3219	0.54	-1.6
3,820,923	-		Echvi_3219	0.54	-0.8
3,820,931	-		Echvi_3219	0.55	-0.9
3,820,943	-		Echvi_3219	0.56	-1.0
3,820,943	-		Echvi_3219	0.56	-1.1
3,820,969	+		Echvi_3219	0.58	-0.0
3,820,995	-		Echvi_3219	0.61	-2.1
3,821,011	+		Echvi_3219	0.62	+2.4
3,821,015	+		Echvi_3219	0.63	-0.3
3,821,016	-		Echvi_3219	0.63	+1.5
3,821,035	+		Echvi_3219	0.65	+0.2
3,821,035	+		Echvi_3219	0.65	+1.1
3,821,036	-		Echvi_3219	0.65	-1.1
3,821,086	-		Echvi_3219	0.70	-1.2
3,821,086	-		Echvi_3219	0.70	+0.2
3,821,118	-		Echvi_3219	0.73	+1.8
3,821,137	+		Echvi_3219	0.75	+0.4
3,821,137	+		Echvi_3219	0.75	-0.7
3,821,137	+		Echvi_3219	0.75	+0.4
3,821,137	+		Echvi_3219	0.75	-1.9
3,821,137	+		Echvi_3219	0.75	-0.4
3,821,138	-		Echvi_3219	0.75	+0.2
3,821,140	-		Echvi_3219	0.75	+0.2
3,821,140	-		Echvi_3219	0.75	+0.5
3,821,161	+		Echvi_3219	0.77	-1.1
3,821,272	+		Echvi_3219	0.88	+1.3
3,821,272	+		Echvi_3219	0.88	+0.1
3,821,287	+		Echvi_3219	0.89	-0.4
3,821,287	+		Echvi_3219	0.89	-1.3
3,821,330	-				-0.4
3,821,330	-				-0.1
3,821,330	-				-0.7
3,821,330	-				-1.6
3,821,344	-				+0.4
3,821,403	-				+0.8
3,821,425	+				+0.1
3,821,455	+				-0.2
3,821,455	+				+1.1
3,821,455	+				+0.5
3,821,456	-				+0.4
3,821,488	+				+0.1
3,821,488	+				-1.2
3,821,634	+				+0.4
3,821,654	+				+1.8
3,821,671	-				-0.6
3,821,691	+				+1.1
3,821,698	+				-0.6
3,821,698	+				+0.1
3,821,743	-				-0.7
3,821,796	+				+0.2
3,821,880	-		Echvi_3220	0.13	-0.1
3,821,925	-		Echvi_3220	0.23	+1.3
3,821,937	+		Echvi_3220	0.25	+1.8
3,821,937	+		Echvi_3220	0.25	-1.2
3,821,938	-		Echvi_3220	0.26	-3.0
3,821,968	+		Echvi_3220	0.32	-0.8
3,821,969	-		Echvi_3220	0.32	-1.3
3,821,969	-		Echvi_3220	0.32	-2.2
3,821,972	+		Echvi_3220	0.33	-0.2
3,822,336	-				-1.0
3,822,340	+				-0.2
3,822,345	+				+0.2
3,822,345	+				+0.1
3,822,345	+				-0.5