Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3161

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
3,766,808	-				-1.2
3,766,847	+				+0.1
3,766,848	-				+2.7
3,766,848	-				-1.4
3,766,880	-		Echvi_3160	0.11	-0.7
3,766,880	-		Echvi_3160	0.11	+2.1
3,766,887	+		Echvi_3160	0.12	-0.0
3,766,908	-		Echvi_3160	0.14	-1.3
3,767,068	-		Echvi_3160	0.30	-0.3
3,767,068	-		Echvi_3160	0.30	-0.5
3,767,098	+		Echvi_3160	0.33	-0.1
3,767,098	+		Echvi_3160	0.33	+0.5
3,767,099	-		Echvi_3160	0.33	-0.1
3,767,112	+		Echvi_3160	0.35	+0.7
3,767,112	+		Echvi_3160	0.35	+1.1
3,767,130	+		Echvi_3160	0.37	+0.6
3,767,131	-		Echvi_3160	0.37	-1.5
3,767,131	-		Echvi_3160	0.37	-1.9
3,767,164	+		Echvi_3160	0.40	+0.9
3,767,177	-		Echvi_3160	0.41	-0.2
3,767,192	+		Echvi_3160	0.43	-0.2
3,767,247	+		Echvi_3160	0.49	-1.7
3,767,248	-		Echvi_3160	0.49	+0.2
3,767,383	+		Echvi_3160	0.63	+0.8
3,767,383	+		Echvi_3160	0.63	-0.1
3,767,386	+		Echvi_3160	0.63	+2.5
3,767,412	-		Echvi_3160	0.66	+0.8
3,767,439	+		Echvi_3160	0.68	+1.2
3,767,440	-		Echvi_3160	0.68	+0.3
3,767,514	+		Echvi_3160	0.76	+0.6
3,767,539	-		Echvi_3160	0.79	+1.0
3,767,583	+		Echvi_3160	0.83	+0.9
3,767,584	-		Echvi_3160	0.83	-0.5
3,767,634	+		Echvi_3160	0.88	-0.2
3,767,668	-				-1.9
3,767,668	-				-0.4
3,767,678	-				-0.6
3,767,745	-				+1.5
3,767,745	-				+0.5
3,767,763	+				-0.2
3,767,765	+				-0.3
3,767,765	+				+0.3
3,767,766	-				-1.1
3,767,777	-				+0.5
3,767,777	-				-0.4
3,767,777	-				+0.3
3,767,843	-				-1.2
3,767,843	-				-0.7
3,767,847	+				+0.8
3,767,889	+		Echvi_3161	0.14	+1.1
3,767,946	+		Echvi_3161	0.20	+0.7
3,767,968	-		Echvi_3161	0.22	-0.0
3,768,021	+		Echvi_3161	0.27	+0.7
3,768,045	-		Echvi_3161	0.30	+0.1
3,768,071	-		Echvi_3161	0.32	-1.4
3,768,071	-		Echvi_3161	0.32	+0.0
3,768,071	-		Echvi_3161	0.32	-0.5
3,768,071	-		Echvi_3161	0.32	-1.9
3,768,071	-		Echvi_3161	0.32	-1.2
3,768,084	+		Echvi_3161	0.34	+2.9
3,768,085	-		Echvi_3161	0.34	+0.7
3,768,121	+		Echvi_3161	0.37	-1.0
3,768,231	+		Echvi_3161	0.48	+0.8
3,768,254	-		Echvi_3161	0.51	+0.6
3,768,296	-		Echvi_3161	0.55	-1.3
3,768,312	-		Echvi_3161	0.56	-1.1
3,768,347	-		Echvi_3161	0.60	+0.2
3,768,348	+		Echvi_3161	0.60	+0.8
3,768,349	-		Echvi_3161	0.60	-0.7
3,768,349	-		Echvi_3161	0.60	+0.2
3,768,349	-		Echvi_3161	0.60	-0.4
3,768,349	-		Echvi_3161	0.60	-1.3
3,768,349	-		Echvi_3161	0.60	-0.6
3,768,352	-		Echvi_3161	0.60	-0.8
3,768,398	-		Echvi_3161	0.65	+0.2
3,768,406	+		Echvi_3161	0.66	+1.2
3,768,407	-		Echvi_3161	0.66	-0.5
3,768,408	+		Echvi_3161	0.66	+1.0
3,768,408	+		Echvi_3161	0.66	+1.2
3,768,442	+		Echvi_3161	0.69	-0.5
3,768,443	-		Echvi_3161	0.70	-0.4
3,768,505	-		Echvi_3161	0.76	+0.3
3,768,527	+				-0.2
3,768,619	-		Echvi_3161	0.87	-1.8
3,768,619	-		Echvi_3161	0.87	+1.8
3,768,621	+		Echvi_3161	0.87	-0.3
3,768,621	+		Echvi_3161	0.87	+2.1
3,768,667	+				+1.1
3,768,685	-				-1.0
3,768,685	-				+0.1
3,768,685	-				+0.7
3,768,685	-				-0.7
3,768,685	-				-1.1
3,768,685	-				-0.4
3,768,687	-				-0.5
3,768,687	-				+1.1
3,768,687	-				+0.1
3,768,689	-				-0.9
3,768,689	-				-0.8
3,768,746	+				+1.5
3,768,780	+				+0.7
3,768,845	+				+1.3
3,768,846	-				-0.7
3,768,958	+		Echvi_3162	0.23	+1.1
3,769,054	-		Echvi_3162	0.35	+0.3
3,769,085	-		Echvi_3162	0.39	-0.5
3,769,119	+		Echvi_3162	0.43	-0.5
3,769,120	-		Echvi_3162	0.43	-0.3
3,769,120	-		Echvi_3162	0.43	+0.5
3,769,171	-		Echvi_3162	0.49	-0.6
3,769,182	+		Echvi_3162	0.50	-1.0
3,769,183	-		Echvi_3162	0.50	-0.0
3,769,214	-		Echvi_3162	0.54	-2.2
3,769,214	-		Echvi_3162	0.54	+0.8
3,769,252	-		Echvi_3162	0.59	+0.6
3,769,252	-		Echvi_3162	0.59	+1.1
3,769,252	-		Echvi_3162	0.59	+0.1
3,769,273	+		Echvi_3162	0.61	+1.0
3,769,273	+		Echvi_3162	0.61	+1.4
3,769,340	-		Echvi_3162	0.69	-1.1
3,769,345	+		Echvi_3162	0.70	+1.4
3,769,346	-		Echvi_3162	0.70	-0.7
3,769,347	+		Echvi_3162	0.70	+0.5
3,769,347	+		Echvi_3162	0.70	-1.1
3,769,348	-		Echvi_3162	0.70	-0.1
3,769,348	-		Echvi_3162	0.70	-0.6
3,769,420	-		Echvi_3162	0.79	-0.5
3,769,420	-		Echvi_3162	0.79	-0.3
3,769,420	-		Echvi_3162	0.79	-0.5
3,769,423	+		Echvi_3162	0.79	+2.1
3,769,424	-		Echvi_3162	0.79	-0.6
3,769,469	-		Echvi_3162	0.85	-0.5
3,769,508	-		Echvi_3162	0.90	+0.3
3,769,525	-				+2.3
3,769,576	-				-0.7
3,769,583	-				-0.2
3,769,739	-		Echvi_3163	0.17	+1.1
3,769,739	-		Echvi_3163	0.17	-1.2