Experiment: m.b. Carbenicillin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3144 and Echvi_3145 are separated by 95 nucleotides Echvi_3145 and Echvi_3146 are separated by 50 nucleotides
Echvi_3144: Echvi_3144 - hypothetical protein, at 3,755,247 to 3,756,155
_3144
Echvi_3145: Echvi_3145 - hypothetical protein, at 3,756,251 to 3,756,673
_3145
Echvi_3146: Echvi_3146 - hypothetical protein, at 3,756,724 to 3,757,611
_3146
Position (kb)
3756
3757 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3756.203 kb on - strand at 3756.237 kb on - strand at 3756.273 kb on + strand at 3756.327 kb on + strand, within Echvi_3145 at 3756.331 kb on + strand, within Echvi_3145 at 3756.347 kb on - strand, within Echvi_3145 at 3756.357 kb on + strand, within Echvi_3145 at 3756.361 kb on + strand, within Echvi_3145 at 3756.361 kb on + strand, within Echvi_3145 at 3756.362 kb on - strand, within Echvi_3145 at 3756.363 kb on + strand, within Echvi_3145 at 3756.363 kb on + strand, within Echvi_3145 at 3756.363 kb on + strand, within Echvi_3145 at 3756.364 kb on - strand, within Echvi_3145 at 3756.364 kb on - strand, within Echvi_3145 at 3756.364 kb on - strand, within Echvi_3145 at 3756.436 kb on + strand, within Echvi_3145 at 3756.441 kb on + strand, within Echvi_3145 at 3756.441 kb on + strand, within Echvi_3145 at 3756.441 kb on + strand, within Echvi_3145 at 3756.441 kb on + strand, within Echvi_3145 at 3756.442 kb on - strand, within Echvi_3145 at 3756.442 kb on - strand, within Echvi_3145 at 3756.558 kb on - strand, within Echvi_3145 at 3756.563 kb on + strand, within Echvi_3145 at 3756.563 kb on + strand, within Echvi_3145 at 3756.565 kb on + strand, within Echvi_3145 at 3756.614 kb on + strand, within Echvi_3145 at 3756.615 kb on - strand, within Echvi_3145 at 3756.616 kb on + strand, within Echvi_3145 at 3756.617 kb on - strand, within Echvi_3145 at 3756.617 kb on - strand, within Echvi_3145 at 3756.703 kb on - strand at 3757.673 kb on - strand at 3757.673 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.2 mg/ml remove 3,756,203 - -0.5 3,756,237 - -0.1 3,756,273 + -0.7 3,756,327 + Echvi_3145 0.18 -0.9 3,756,331 + Echvi_3145 0.19 -0.6 3,756,347 - Echvi_3145 0.23 +0.5 3,756,357 + Echvi_3145 0.25 +0.0 3,756,361 + Echvi_3145 0.26 -0.2 3,756,361 + Echvi_3145 0.26 -0.6 3,756,362 - Echvi_3145 0.26 -0.9 3,756,363 + Echvi_3145 0.26 -0.4 3,756,363 + Echvi_3145 0.26 -0.1 3,756,363 + Echvi_3145 0.26 +0.7 3,756,364 - Echvi_3145 0.27 +2.4 3,756,364 - Echvi_3145 0.27 +0.6 3,756,364 - Echvi_3145 0.27 -1.5 3,756,436 + Echvi_3145 0.44 -0.1 3,756,441 + Echvi_3145 0.45 -1.1 3,756,441 + Echvi_3145 0.45 -1.5 3,756,441 + Echvi_3145 0.45 -1.4 3,756,441 + Echvi_3145 0.45 -2.6 3,756,442 - Echvi_3145 0.45 -2.1 3,756,442 - Echvi_3145 0.45 +0.0 3,756,558 - Echvi_3145 0.73 +1.1 3,756,563 + Echvi_3145 0.74 -0.9 3,756,563 + Echvi_3145 0.74 -0.8 3,756,565 + Echvi_3145 0.74 -0.6 3,756,614 + Echvi_3145 0.86 -1.5 3,756,615 - Echvi_3145 0.86 -0.6 3,756,616 + Echvi_3145 0.86 -1.2 3,756,617 - Echvi_3145 0.87 -0.6 3,756,617 - Echvi_3145 0.87 -1.6 3,756,703 - -0.8 3,757,673 - -0.1 3,757,673 - -0.7
Or see this region's nucleotide sequence