Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3107

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
3,714,106	+		Echvi_3106	0.38	-0.5
3,714,143	-		Echvi_3106	0.40	+1.2
3,714,146	-		Echvi_3106	0.41	+1.7
3,714,275	+		Echvi_3106	0.50	+0.3
3,714,275	+		Echvi_3106	0.50	-1.2
3,714,489	-		Echvi_3106	0.67	-0.3
3,714,493	-		Echvi_3106	0.67	+0.4
3,714,546	-		Echvi_3106	0.71	+0.6
3,714,569	+		Echvi_3106	0.73	-0.5
3,714,646	+		Echvi_3106	0.78	-0.4
3,714,646	+		Echvi_3106	0.78	+0.6
3,714,646	+		Echvi_3106	0.78	-2.4
3,714,649	-		Echvi_3106	0.79	+1.9
3,714,709	+		Echvi_3106	0.83	-1.8
3,714,709	+		Echvi_3106	0.83	+0.5
3,714,710	-		Echvi_3106	0.83	+0.8
3,714,710	-		Echvi_3106	0.83	+0.0
3,714,719	-		Echvi_3106	0.84	-0.2
3,714,823	+				-0.5
3,714,824	-				-0.5
3,714,931	-				-0.5
3,714,931	-				-0.3
3,714,960	+				+0.9
3,714,981	+				-0.7
3,714,982	-				-1.0
3,715,016	-				-2.2
3,715,040	+				+0.6
3,715,045	+				-1.2
3,715,046	-				+0.3
3,715,050	-				+0.8
3,715,050	-				+0.3
3,715,050	-				+0.5
3,715,050	-				+0.9
3,715,050	-				-0.1
3,715,072	+				+1.2
3,715,169	+		Echvi_3107	0.13	+0.4
3,715,169	+		Echvi_3107	0.13	+0.2
3,715,240	+		Echvi_3107	0.21	-1.8
3,715,268	+		Echvi_3107	0.24	+0.2
3,715,284	-		Echvi_3107	0.26	+0.1
3,715,301	+		Echvi_3107	0.27	-1.1
3,715,301	+		Echvi_3107	0.27	+0.4
3,715,301	+		Echvi_3107	0.27	+0.4
3,715,301	+		Echvi_3107	0.27	-1.9
3,715,302	-		Echvi_3107	0.28	+0.9
3,715,306	+		Echvi_3107	0.28	+0.6
3,715,306	+		Echvi_3107	0.28	-0.0
3,715,311	-		Echvi_3107	0.29	+2.1
3,715,358	+		Echvi_3107	0.34	+0.3
3,715,361	-		Echvi_3107	0.34	+0.6
3,715,384	+		Echvi_3107	0.36	+0.3
3,715,385	-		Echvi_3107	0.36	+2.7
3,715,455	+		Echvi_3107	0.44	-1.5
3,715,455	+		Echvi_3107	0.44	-1.4
3,715,461	-		Echvi_3107	0.45	+1.7
3,715,462	+		Echvi_3107	0.45	+1.0
3,715,462	+		Echvi_3107	0.45	+0.5
3,715,463	-		Echvi_3107	0.45	+2.1
3,715,463	-		Echvi_3107	0.45	-1.0
3,715,463	-		Echvi_3107	0.45	-0.5
3,715,603	+		Echvi_3107	0.60	-0.2
3,715,603	+		Echvi_3107	0.60	+0.9
3,715,720	-		Echvi_3107	0.72	+1.1
3,715,743	-		Echvi_3107	0.75	+0.1
3,715,841	-		Echvi_3107	0.85	+0.3
3,715,841	-		Echvi_3107	0.85	+0.5
3,715,845	+		Echvi_3107	0.86	-0.8
3,715,958	+				+0.3
3,716,001	-				+0.8
3,716,155	-				+2.1
3,716,159	-				+1.0
3,716,163	-				+0.9
3,716,200	+				+0.2
3,716,200	+				-1.2
3,716,212	+				+0.8
3,716,212	+				+0.1
3,716,219	+				-0.1
3,716,219	+				+1.8
3,716,220	-				+0.2
3,716,241	+				-1.8
3,716,352	+				-0.3
3,716,354	+				-0.1
3,716,355	-				-0.6
3,716,355	-				-1.2
3,716,391	+				-1.5
3,716,399	+				-1.2
3,716,408	-				-0.6
3,716,409	+				-0.7
3,716,410	-				+1.5
3,716,429	+				+2.9
3,716,430	-				+0.1
3,716,430	-				-0.2
3,716,430	-				-0.1
3,716,487	+				-0.2
3,716,499	-				-2.0
3,716,505	-				+1.4
3,716,539	+				+0.1
3,716,540	-				+1.0
3,716,603	-				-0.2
3,716,604	+				-1.0
3,716,605	-				-0.5
3,716,621	+		Echvi_3108	0.11	-1.0
3,716,621	+		Echvi_3108	0.11	+0.3
3,716,621	+		Echvi_3108	0.11	-1.8
3,716,621	+		Echvi_3108	0.11	-0.5
3,716,622	-		Echvi_3108	0.11	+0.3
3,716,624	-		Echvi_3108	0.12	-0.1
3,716,630	-		Echvi_3108	0.12	-0.2
3,716,632	-		Echvi_3108	0.12	+0.2
3,716,632	-		Echvi_3108	0.12	-1.1
3,716,785	+		Echvi_3108	0.28	+3.1
3,716,819	+		Echvi_3108	0.32	-0.2
3,716,819	+		Echvi_3108	0.32	+0.5
3,716,820	-		Echvi_3108	0.32	+1.5
3,716,859	+		Echvi_3108	0.36	+0.1
3,716,859	+		Echvi_3108	0.36	-1.6
3,716,859	+		Echvi_3108	0.36	-1.2
3,716,859	+		Echvi_3108	0.36	+0.2
3,716,859	+		Echvi_3108	0.36	+1.0
3,716,859	+		Echvi_3108	0.36	-0.2
3,716,859	+		Echvi_3108	0.36	-1.1
3,716,860	-		Echvi_3108	0.36	+0.1
3,716,860	-		Echvi_3108	0.36	+1.7
3,716,860	-		Echvi_3108	0.36	+0.8
3,716,860	-		Echvi_3108	0.36	-1.2
3,716,860	-		Echvi_3108	0.36	+0.9
3,716,860	-		Echvi_3108	0.36	-0.0
3,716,860	-		Echvi_3108	0.36	+2.1
3,716,861	+		Echvi_3108	0.36	+0.0
3,716,861	+		Echvi_3108	0.36	-0.0
3,716,861	+		Echvi_3108	0.36	+0.1
3,716,861	+		Echvi_3108	0.36	+0.4
3,716,862	-		Echvi_3108	0.36	-0.4
3,716,862	-		Echvi_3108	0.36	+0.8
3,716,862	-		Echvi_3108	0.36	-0.1
3,716,882	-		Echvi_3108	0.38	-0.1
3,716,942	-		Echvi_3108	0.45	-0.4
3,716,958	+		Echvi_3108	0.46	+0.7
3,716,959	-		Echvi_3108	0.46	-0.4
3,716,973	+		Echvi_3108	0.48	-1.2