Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2942

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
3,519,630	-		Echvi_2941	0.41	+0.2
3,519,663	+		Echvi_2941	0.43	+0.1
3,519,663	+		Echvi_2941	0.43	+1.6
3,519,664	-		Echvi_2941	0.43	+0.7
3,519,746	-		Echvi_2941	0.49	+0.6
3,519,854	+		Echvi_2941	0.57	+0.1
3,519,939	+		Echvi_2941	0.64	-1.7
3,519,939	+		Echvi_2941	0.64	+0.8
3,519,939	+		Echvi_2941	0.64	+0.2
3,519,940	-		Echvi_2941	0.64	+1.1
3,519,940	-		Echvi_2941	0.64	+2.1
3,519,940	-		Echvi_2941	0.64	-0.5
3,519,962	+		Echvi_2941	0.65	+0.2
3,519,963	-		Echvi_2941	0.66	+1.7
3,520,023	+		Echvi_2941	0.70	+0.1
3,520,024	-		Echvi_2941	0.70	+0.2
3,520,024	-		Echvi_2941	0.70	+0.3
3,520,024	-		Echvi_2941	0.70	+0.0
3,520,044	-		Echvi_2941	0.72	+0.2
3,520,067	+		Echvi_2941	0.73	+1.2
3,520,067	+		Echvi_2941	0.73	-0.8
3,520,097	+		Echvi_2941	0.76	+1.3
3,520,098	-		Echvi_2941	0.76	-0.6
3,520,165	+		Echvi_2941	0.81	-0.1
3,520,169	+		Echvi_2941	0.81	-0.5
3,520,169	+		Echvi_2941	0.81	-1.0
3,520,169	+		Echvi_2941	0.81	-0.7
3,520,170	-		Echvi_2941	0.81	-1.4
3,520,170	-		Echvi_2941	0.81	+3.1
3,520,226	+		Echvi_2941	0.85	-0.5
3,520,231	+		Echvi_2941	0.85	-0.3
3,520,232	-		Echvi_2941	0.86	+0.6
3,520,284	+		Echvi_2941	0.89	+0.2
3,520,284	+		Echvi_2941	0.89	+2.1
3,520,285	-		Echvi_2941	0.89	-0.2
3,520,395	+				-0.3
3,520,398	-				+0.4
3,520,638	+				-0.5
3,520,639	-				+0.7
3,520,749	+		Echvi_2942	0.18	-0.1
3,520,750	-		Echvi_2942	0.18	-0.9
3,520,752	-		Echvi_2942	0.18	+0.9
3,520,781	+		Echvi_2942	0.22	+0.1
3,520,782	-		Echvi_2942	0.22	-0.4
3,520,878	+		Echvi_2942	0.33	+1.6
3,521,034	+		Echvi_2942	0.51	-1.4
3,521,034	+				+0.5
3,521,094	-		Echvi_2942	0.58	-1.1
3,521,112	+		Echvi_2942	0.60	-0.1
3,521,112	+		Echvi_2942	0.60	+0.2
3,521,113	-		Echvi_2942	0.60	-0.3
3,521,159	-		Echvi_2942	0.65	+0.1
3,521,167	-		Echvi_2942	0.66	+0.9
3,521,173	-		Echvi_2942	0.67	+2.1
3,521,176	-		Echvi_2942	0.67	+0.2
3,521,176	-		Echvi_2942	0.67	+0.9
3,521,207	+		Echvi_2942	0.71	-0.1
3,521,208	-		Echvi_2942	0.71	-0.1
3,521,265	+		Echvi_2942	0.77	-2.6
3,521,275	+		Echvi_2942	0.78	+0.6
3,521,276	-		Echvi_2942	0.78	+0.5
3,521,309	-		Echvi_2942	0.82	-0.5
3,521,309	-		Echvi_2942	0.82	-0.3
3,521,317	-		Echvi_2942	0.83	+1.1
3,521,377	-				-0.2
3,521,377	-				+1.3
3,521,377	-				-0.2
3,521,391	+				+1.8
3,521,440	-				-0.1
3,521,465	-				+1.0
3,521,465	-				-0.8
3,521,465	-				+1.8
3,521,465	-				-0.8
3,521,465	-				-0.4
3,521,465	-				+0.5
3,521,465	-				-0.3
3,521,491	+				-0.9
3,521,504	-				-0.6
3,521,569	-		Echvi_2943	0.25	+1.1
3,521,598	+		Echvi_2943	0.32	+1.1
3,521,599	-		Echvi_2943	0.32	-1.5
3,521,737	-		Echvi_2943	0.65	+1.1
3,521,818	-		Echvi_2943	0.85	-0.7
3,521,879	+				+0.4
3,521,990	-				+0.5
3,522,007	-		Echvi_2944	0.10	+0.6
3,522,007	-		Echvi_2944	0.10	+0.3
3,522,082	+		Echvi_2944	0.19	-0.3
3,522,141	+		Echvi_2944	0.25	+0.2
3,522,141	+		Echvi_2944	0.25	-1.3
3,522,141	+		Echvi_2944	0.25	-0.9
3,522,141	+		Echvi_2944	0.25	+0.1
3,522,141	+		Echvi_2944	0.25	+0.2
3,522,142	-		Echvi_2944	0.25	-0.4
3,522,142	-		Echvi_2944	0.25	+0.9
3,522,142	-		Echvi_2944	0.25	+0.4
3,522,145	+		Echvi_2944	0.25	-0.7
3,522,279	+		Echvi_2944	0.40	+0.5
3,522,281	+		Echvi_2944	0.40	+0.2
3,522,281	+		Echvi_2944	0.40	-0.1
3,522,282	-		Echvi_2944	0.40	-1.2
3,522,282	-		Echvi_2944	0.40	-0.0
3,522,282	-		Echvi_2944	0.40	-0.8
3,522,318	-		Echvi_2944	0.44	-0.9
3,522,376	+		Echvi_2944	0.50	+0.4
3,522,377	-		Echvi_2944	0.50	-0.6