Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2770

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
3,307,200	+		Echvi_2769	0.56	-0.2
3,307,211	-		Echvi_2769	0.57	+0.1
3,307,318	+		Echvi_2769	0.62	+0.4
3,307,340	+		Echvi_2769	0.63	+0.6
3,307,341	-		Echvi_2769	0.63	-1.2
3,307,344	+		Echvi_2769	0.63	-0.5
3,307,344	+		Echvi_2769	0.63	+0.3
3,307,347	+		Echvi_2769	0.63	+0.3
3,307,398	-		Echvi_2769	0.65	-0.1
3,307,398	-		Echvi_2769	0.65	-0.9
3,307,561	+		Echvi_2769	0.73	-0.6
3,307,562	-		Echvi_2769	0.73	+1.2
3,307,566	+		Echvi_2769	0.73	-1.0
3,307,653	+		Echvi_2769	0.77	+0.3
3,307,708	+		Echvi_2769	0.80	-0.9
3,307,708	+		Echvi_2769	0.80	-0.2
3,307,715	-		Echvi_2769	0.80	+0.3
3,307,719	+		Echvi_2769	0.80	-0.0
3,307,719	+		Echvi_2769	0.80	+3.9
3,307,720	-		Echvi_2769	0.80	+0.7
3,307,763	+		Echvi_2769	0.82	-1.9
3,307,763	+		Echvi_2769	0.82	-0.0
3,307,763	+		Echvi_2769	0.82	-0.3
3,307,764	-		Echvi_2769	0.82	-0.0
3,307,764	-		Echvi_2769	0.82	+1.6
3,307,764	-		Echvi_2769	0.82	+1.1
3,307,766	-		Echvi_2769	0.82	+0.2
3,308,119	-				-0.3
3,308,157	-				-0.5
3,308,169	+				-0.7
3,308,173	+				-1.0
3,308,186	+				+2.1
3,308,398	+		Echvi_2770	0.11	-0.8
3,308,500	-		Echvi_2770	0.17	-0.0
3,308,500	-		Echvi_2770	0.17	-0.4
3,308,523	-		Echvi_2770	0.18	-0.3
3,308,636	-		Echvi_2770	0.24	-1.1
3,308,747	-		Echvi_2770	0.30	+1.7
3,308,784	-		Echvi_2770	0.32	-0.3
3,308,784	-		Echvi_2770	0.32	-0.1
3,308,786	-		Echvi_2770	0.32	-0.4
3,308,834	-		Echvi_2770	0.35	-2.5
3,308,840	+		Echvi_2770	0.35	-0.2
3,308,841	-		Echvi_2770	0.35	-0.9
3,308,842	+		Echvi_2770	0.35	+0.7
3,308,843	-		Echvi_2770	0.36	-0.5
3,308,871	+		Echvi_2770	0.37	+0.0
3,308,871	+		Echvi_2770	0.37	-0.6
3,309,000	+		Echvi_2770	0.44	+0.8
3,309,050	+		Echvi_2770	0.47	+0.1
3,309,051	-		Echvi_2770	0.47	-2.1
3,309,051	-		Echvi_2770	0.47	+0.1
3,309,079	+		Echvi_2770	0.48	-0.3
3,309,108	-		Echvi_2770	0.50	-1.4
3,309,175	+		Echvi_2770	0.54	-0.1
3,309,176	-		Echvi_2770	0.54	-1.9
3,309,231	-		Echvi_2770	0.57	-0.5
3,309,233	-		Echvi_2770	0.57	-1.7
3,309,241	+		Echvi_2770	0.57	-0.1
3,309,265	+		Echvi_2770	0.59	-0.9
3,309,293	-		Echvi_2770	0.60	-1.6
3,309,304	+		Echvi_2770	0.61	+2.2
3,309,335	+		Echvi_2770	0.62	+0.5
3,309,338	+		Echvi_2770	0.63	+0.1
3,309,349	+		Echvi_2770	0.63	-0.6
3,309,350	-		Echvi_2770	0.63	+0.2
3,309,377	-		Echvi_2770	0.65	-0.6
3,309,377	-		Echvi_2770	0.65	+0.6
3,309,433	-		Echvi_2770	0.68	-1.8
3,309,566	-		Echvi_2770	0.75	-1.2
3,309,599	+		Echvi_2770	0.77	+0.5
3,309,660	+		Echvi_2770	0.80	-0.0
3,309,661	-		Echvi_2770	0.80	-0.8
3,309,697	+		Echvi_2770	0.82	+0.7
3,309,759	+		Echvi_2770	0.85	+0.5
3,309,815	-		Echvi_2770	0.89	-0.1
3,309,868	+				-0.7
3,309,869	-				+1.1
3,309,902	+				+1.9
3,309,903	-				+3.1
3,309,950	+				-1.5
3,309,950	+				+0.3
3,309,968	-				+0.1
3,309,968	-				+0.5
3,310,011	-				+0.1
3,310,023	-				-0.1
3,310,057	+				+0.5
3,310,057	+				-0.2
3,310,057	+				-0.0
3,310,057	+				+0.1
3,310,061	-				+1.4
3,310,061	-				-1.3
3,310,063	+				+0.2
3,310,064	-				-1.3
3,310,067	+				-0.8
3,310,067	+				+2.1
3,310,067	+				+0.7
3,310,067	+				+0.7
3,310,068	-				-0.5
3,310,068	-				+0.1
3,310,068	-				-0.3
3,310,068	-				+0.2
3,310,068	-				+0.2
3,310,068	-				-0.6
3,310,097	-				-0.7
3,310,099	-				-1.1
3,310,170	-				-0.5
3,310,204	-				-1.0
3,310,309	-				+0.1
3,310,309	-				+0.5
3,310,309	-				+3.4
3,310,442	+		Echvi_2771	0.11	-0.7
3,310,649	-		Echvi_2771	0.20	+0.2
3,310,704	+		Echvi_2771	0.22	-1.2
3,310,705	-		Echvi_2771	0.22	+2.1
3,310,705	-		Echvi_2771	0.22	+0.3
3,310,705	-		Echvi_2771	0.22	-0.5
3,310,708	-		Echvi_2771	0.22	-1.7
3,310,858	+		Echvi_2771	0.28	-0.1
3,310,859	-		Echvi_2771	0.28	+0.4
3,310,860	+		Echvi_2771	0.28	-0.4
3,310,860	+		Echvi_2771	0.28	-0.8
3,310,861	-		Echvi_2771	0.28	-1.0
3,310,861	-		Echvi_2771	0.28	-1.3
3,310,902	-		Echvi_2771	0.30	+0.3
3,310,924	-		Echvi_2771	0.31	-1.1