Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2672

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
3,172,483	-		Echvi_2671	0.50	-1.4
3,172,483	-		Echvi_2671	0.50	-1.0
3,172,516	-		Echvi_2671	0.51	-0.3
3,172,516	-		Echvi_2671	0.51	+0.7
3,172,617	+		Echvi_2671	0.57	+2.5
3,172,780	-		Echvi_2671	0.65	-0.5
3,172,838	+		Echvi_2671	0.68	-0.3
3,172,838	+		Echvi_2671	0.68	-1.2
3,172,839	-		Echvi_2671	0.68	+0.5
3,172,947	+		Echvi_2671	0.74	-0.2
3,172,948	-		Echvi_2671	0.74	+0.1
3,172,948	-		Echvi_2671	0.74	+2.1
3,172,948	-		Echvi_2671	0.74	-1.2
3,172,950	+		Echvi_2671	0.74	+2.8
3,172,950	+		Echvi_2671	0.74	+0.1
3,172,951	-		Echvi_2671	0.74	-0.4
3,172,973	-		Echvi_2671	0.75	-0.6
3,173,093	-		Echvi_2671	0.81	-1.8
3,173,136	-		Echvi_2671	0.83	+0.1
3,173,174	-		Echvi_2671	0.85	-1.5
3,173,183	-		Echvi_2671	0.86	+0.3
3,173,232	+		Echvi_2671	0.88	-0.2
3,173,232	+		Echvi_2671	0.88	+0.2
3,173,233	-		Echvi_2671	0.88	+0.6
3,173,233	-		Echvi_2671	0.88	-2.2
3,173,234	+		Echvi_2671	0.88	+0.4
3,173,235	-		Echvi_2671	0.88	+1.1
3,173,235	-		Echvi_2671	0.88	-1.6
3,173,268	+				+3.1
3,173,314	+				+0.5
3,173,353	-				-0.3
3,173,378	+				+0.3
3,173,379	-				-1.8
3,173,479	-				-0.0
3,173,480	+				-1.0
3,173,480	+				-0.0
3,173,480	+				+0.5
3,173,481	-				-0.9
3,173,481	-				-1.4
3,173,481	-				-0.1
3,173,481	-				-0.9
3,173,481	-				-0.7
3,173,501	-				+0.2
3,173,569	+				-1.1
3,173,570	-				-0.1
3,173,596	+				-2.2
3,173,596	+				-0.1
3,173,597	-				-0.9
3,173,609	+				-1.4
3,173,609	+				-0.9
3,173,609	+				-0.6
3,173,610	-		Echvi_2672	0.10	+2.0
3,173,611	+		Echvi_2672	0.10	+0.7
3,173,611	+		Echvi_2672	0.10	+2.1
3,173,612	-		Echvi_2672	0.10	-0.1
3,173,615	+		Echvi_2672	0.10	-0.5
3,173,615	+		Echvi_2672	0.10	-1.9
3,173,616	-		Echvi_2672	0.10	+0.5
3,173,616	-		Echvi_2672	0.10	-0.2
3,173,616	-		Echvi_2672	0.10	-0.4
3,173,616	-		Echvi_2672	0.10	-2.0
3,173,616	-		Echvi_2672	0.10	-0.8
3,173,617	+		Echvi_2672	0.11	+0.1
3,173,618	-		Echvi_2672	0.11	-0.6
3,173,618	-		Echvi_2672	0.11	+0.4
3,173,652	+		Echvi_2672	0.13	+0.7
3,173,674	+		Echvi_2672	0.15	+0.1
3,173,675	-		Echvi_2672	0.15	-0.3
3,173,675	-		Echvi_2672	0.15	+0.3
3,173,694	+		Echvi_2672	0.16	+0.4
3,173,695	-		Echvi_2672	0.16	-1.9
3,173,725	+		Echvi_2672	0.18	+0.8
3,173,726	-				+0.1
3,173,794	+		Echvi_2672	0.23	+0.5
3,173,796	+		Echvi_2672	0.24	+0.3
3,173,797	-		Echvi_2672	0.24	-0.0
3,173,797	-		Echvi_2672	0.24	+1.2
3,173,797	-		Echvi_2672	0.24	-0.7
3,173,800	+		Echvi_2672	0.24	-0.0
3,173,800	+		Echvi_2672	0.24	+2.0
3,173,800	+		Echvi_2672	0.24	+0.5
3,173,875	-		Echvi_2672	0.29	-0.8
3,173,907	+		Echvi_2672	0.32	+1.5
3,173,908	-		Echvi_2672	0.32	+0.1
3,173,908	-		Echvi_2672	0.32	+0.7
3,173,908	-		Echvi_2672	0.32	+1.3
3,173,937	+		Echvi_2672	0.34	+2.1
3,173,959	+		Echvi_2672	0.35	+0.1
3,173,959	+		Echvi_2672	0.35	+1.8
3,173,960	-		Echvi_2672	0.36	+0.5
3,173,960	-		Echvi_2672	0.36	+0.0
3,173,986	+		Echvi_2672	0.37	+1.1
3,173,986	+		Echvi_2672	0.37	+0.6
3,173,989	+		Echvi_2672	0.38	+0.9
3,173,989	+		Echvi_2672	0.38	+0.8
3,173,989	+		Echvi_2672	0.38	+1.1
3,173,990	-		Echvi_2672	0.38	+0.3
3,174,033	-		Echvi_2672	0.41	-0.5
3,174,053	+		Echvi_2672	0.42	+2.2
3,174,072	+		Echvi_2672	0.44	-1.4
3,174,128	-		Echvi_2672	0.48	+0.2
3,174,146	-		Echvi_2672	0.49	+0.5
3,174,149	-		Echvi_2672	0.49	+0.8
3,174,184	-		Echvi_2672	0.52	-0.1
3,174,211	-		Echvi_2672	0.54	-1.6
3,174,211	-		Echvi_2672	0.54	+0.4
3,174,304	+		Echvi_2672	0.61	+2.0
3,174,304	+		Echvi_2672	0.61	-0.1
3,174,456	+		Echvi_2672	0.72	+0.4
3,174,529	+		Echvi_2672	0.77	-0.1
3,174,529	+		Echvi_2672	0.77	-1.1
3,174,654	-		Echvi_2672	0.86	-2.2
3,174,747	+				-0.8
3,174,748	-				+0.5
3,174,781	-				+0.1
3,174,785	-				-0.1
3,174,809	+				+0.3
3,174,809	+				+0.2
3,174,810	-				-0.2
3,174,815	-				-1.7
3,174,875	+				+1.6
3,174,876	-				-0.2
3,174,911	-				-1.5
3,174,986	+				+0.1
3,175,000	-				+0.1
3,175,000	-				+1.6
3,175,018	+				-0.6
3,175,018	+				+0.2
3,175,019	-				-0.4
3,175,113	+		Echvi_2673	0.13	-0.2
3,175,113	+		Echvi_2673	0.13	+0.5
3,175,113	+		Echvi_2673	0.13	+0.2
3,175,113	+		Echvi_2673	0.13	+0.5
3,175,116	+		Echvi_2673	0.13	-0.6
3,175,116	+		Echvi_2673	0.13	-0.2
3,175,117	-		Echvi_2673	0.13	-1.1
3,175,117	-		Echvi_2673	0.13	-0.2
3,175,117	-		Echvi_2673	0.13	-0.3
3,175,117	-		Echvi_2673	0.13	+0.0
3,175,118	+		Echvi_2673	0.13	-0.1
3,175,118	+		Echvi_2673	0.13	+0.7
3,175,119	-		Echvi_2673	0.13	+0.6
3,175,260	+		Echvi_2673	0.21	+0.6
3,175,260	+		Echvi_2673	0.21	+0.7
3,175,260	+		Echvi_2673	0.21	+1.4
3,175,260	+		Echvi_2673	0.21	-1.5
3,175,261	-		Echvi_2673	0.21	+1.1
3,175,261	-		Echvi_2673	0.21	-1.5
3,175,278	+		Echvi_2673	0.22	-0.2
3,175,278	+		Echvi_2673	0.22	-1.5
3,175,278	+		Echvi_2673	0.22	-0.9
3,175,278	+		Echvi_2673	0.22	-0.3
3,175,279	-		Echvi_2673	0.22	-0.2
3,175,279	-		Echvi_2673	0.22	+0.3
3,175,279	-		Echvi_2673	0.22	-0.8
3,175,302	+		Echvi_2673	0.24	+0.2
3,175,340	+		Echvi_2673	0.26	-1.3
3,175,340	+		Echvi_2673	0.26	+0.2
3,175,406	+		Echvi_2673	0.30	-0.3
3,175,446	+		Echvi_2673	0.32	-0.0
3,175,447	-		Echvi_2673	0.32	-0.7
3,175,488	+		Echvi_2673	0.34	+0.9
3,175,488	+		Echvi_2673	0.34	-0.7
3,175,489	-		Echvi_2673	0.34	+0.2
3,175,489	-		Echvi_2673	0.34	-0.4
3,175,489	-		Echvi_2673	0.34	-0.6
3,175,522	-		Echvi_2673	0.36	+0.5
3,175,554	-		Echvi_2673	0.38	-0.4
3,175,645	-		Echvi_2673	0.43	-1.1
3,175,647	+		Echvi_2673	0.44	+1.2
3,175,648	-		Echvi_2673	0.44	-1.1
3,175,728	-		Echvi_2673	0.48	-1.4
3,175,764	+		Echvi_2673	0.50	+0.2
3,175,765	-		Echvi_2673	0.50	-0.4
3,175,765	-		Echvi_2673	0.50	+0.1
3,175,839	+		Echvi_2673	0.55	-2.2
3,175,839	+		Echvi_2673	0.55	-0.4