Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2630

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
3,116,660	+				+0.3
3,116,664	+				-0.8
3,116,688	+				-1.2
3,116,689	-				-1.1
3,116,716	+				-0.9
3,116,716	+				-0.2
3,116,717	-				+1.5
3,116,718	+				-0.5
3,116,751	+		Echvi_2629	0.11	-0.2
3,116,759	-		Echvi_2629	0.13	+0.9
3,116,762	+		Echvi_2629	0.13	-2.0
3,116,783	+		Echvi_2629	0.17	-1.1
3,116,783	+		Echvi_2629	0.17	+0.3
3,116,784	-		Echvi_2629	0.17	-1.3
3,116,798	+		Echvi_2629	0.19	-0.8
3,116,886	-		Echvi_2629	0.33	-2.2
3,116,938	+		Echvi_2629	0.41	-0.8
3,116,945	+		Echvi_2629	0.42	-0.3
3,116,993	+		Echvi_2629	0.50	-0.5
3,116,993	+		Echvi_2629	0.50	-0.9
3,116,994	-		Echvi_2629	0.50	+0.7
3,116,994	-		Echvi_2629	0.50	-1.5
3,116,994	-		Echvi_2629	0.50	+0.4
3,116,994	-		Echvi_2629	0.50	+1.1
3,117,000	+		Echvi_2629	0.51	-0.5
3,117,000	+		Echvi_2629	0.51	+0.5
3,117,001	-		Echvi_2629	0.51	-1.0
3,117,004	+		Echvi_2629	0.52	-1.9
3,117,026	+		Echvi_2629	0.55	-1.1
3,117,037	+		Echvi_2629	0.57	-1.5
3,117,038	-		Echvi_2629	0.57	-0.7
3,117,051	-		Echvi_2629	0.59	-0.4
3,117,058	+		Echvi_2629	0.61	-1.1
3,117,137	+		Echvi_2629	0.73	-1.1
3,117,138	-		Echvi_2629	0.73	+2.5
3,117,196	-		Echvi_2629	0.83	-2.8
3,117,253	+				+0.2
3,117,254	-				-1.2
3,117,301	+				-0.9
3,117,302	-				-0.2
3,117,302	-				-1.1
3,117,316	+				-1.1
3,117,334	+				-0.8
3,117,353	+				+0.4
3,117,357	-				+0.6
3,117,357	-				-0.2
3,117,365	-				-0.7
3,117,386	-				-0.2
3,117,421	-				-1.2
3,117,423	+				+1.1
3,117,487	+				-1.8
3,117,493	-				-1.2
3,117,562	-				+0.7
3,117,613	+				+0.3
3,117,615	+				+0.1
3,117,631	+				-1.1
3,117,632	-				+0.2
3,117,664	-				-0.0
3,117,686	+				-0.7
3,117,710	+				-1.0
3,117,763	-				+0.1
3,117,855	+		Echvi_2630	0.13	-0.9
3,117,855	+		Echvi_2630	0.13	+0.9
3,117,967	-		Echvi_2630	0.19	-0.8
3,118,056	-		Echvi_2630	0.24	+0.3
3,118,064	+		Echvi_2630	0.24	-1.6
3,118,073	+		Echvi_2630	0.25	-1.3
3,118,074	-		Echvi_2630	0.25	+0.2
3,118,074	-		Echvi_2630	0.25	-0.7
3,118,074	-		Echvi_2630	0.25	+1.5
3,118,074	-		Echvi_2630	0.25	+0.0
3,118,117	-		Echvi_2630	0.27	+0.2
3,118,328	-		Echvi_2630	0.39	-0.2
3,118,328	-		Echvi_2630	0.39	-0.8
3,118,351	+		Echvi_2630	0.40	-0.1
3,118,352	-		Echvi_2630	0.40	-0.0
3,118,352	-		Echvi_2630	0.40	+0.1
3,118,352	-		Echvi_2630	0.40	-0.5
3,118,352	-		Echvi_2630	0.40	-0.1
3,118,407	+		Echvi_2630	0.43	-1.0
3,118,408	-		Echvi_2630	0.43	-0.1
3,118,409	+		Echvi_2630	0.43	-2.3
3,118,511	+		Echvi_2630	0.49	-0.1
3,118,511	+		Echvi_2630	0.49	-3.4
3,118,511	+		Echvi_2630	0.49	-1.4
3,118,511	+		Echvi_2630	0.49	-2.3
3,118,511	+		Echvi_2630	0.49	-0.5
3,118,511	+		Echvi_2630	0.49	+0.3
3,118,545	+		Echvi_2630	0.51	-0.5
3,118,545	+		Echvi_2630	0.51	+0.2
3,118,546	-		Echvi_2630	0.51	-0.2
3,118,589	-		Echvi_2630	0.53	+0.8
3,118,710	-		Echvi_2630	0.60	+1.3
3,118,710	-		Echvi_2630	0.60	-1.4
3,118,757	-		Echvi_2630	0.62	+0.5
3,119,094	+		Echvi_2630	0.81	-0.3
3,119,094	+		Echvi_2630	0.81	-1.7
3,119,095	-		Echvi_2630	0.81	-1.1
3,119,257	+		Echvi_2630	0.90	-0.9
3,119,257	+		Echvi_2630	0.90	-2.1
3,119,258	-		Echvi_2630	0.90	-0.5
3,119,258	-		Echvi_2630	0.90	-1.6
3,119,258	-		Echvi_2630	0.90	+0.8
3,119,382	-				-0.3
3,119,405	-				-0.3
3,119,422	-				-0.2
3,119,440	+				-1.5
3,119,441	-				-0.1
3,119,441	-				+0.1
3,119,477	+				-1.9
3,119,497	+				-1.9
3,119,508	+				-2.4
3,119,520	-		Echvi_2631	0.10	+0.8
3,119,534	+		Echvi_2631	0.14	-2.3
3,119,534	+		Echvi_2631	0.14	-3.1
3,119,534	+		Echvi_2631	0.14	-3.5
3,119,535	-		Echvi_2631	0.14	-0.6
3,119,554	+		Echvi_2631	0.18	-2.2
3,119,663	-		Echvi_2631	0.44	-0.7
3,119,872	+				-1.6
3,119,872	+				-0.7
3,119,873	-				-0.7
3,119,877	+				-3.8
3,119,878	-				-0.4
3,119,924	+				-1.8
3,119,925	-				-0.4
3,119,943	+				-3.3
3,119,944	-				+1.1
3,119,971	+				-1.8
3,119,971	+				-3.2
3,119,972	-				+0.5
3,119,972	-				-2.4
3,120,096	-		Echvi_2632	0.19	-3.5
3,120,113	+		Echvi_2632	0.21	-1.1
3,120,169	-		Echvi_2632	0.28	-2.2
3,120,169	-		Echvi_2632	0.28	-0.2
3,120,182	+		Echvi_2632	0.30	-0.9
3,120,294	+		Echvi_2632	0.45	-3.0
3,120,295	-		Echvi_2632	0.45	-0.2
3,120,313	+		Echvi_2632	0.47	-1.1
3,120,314	-		Echvi_2632	0.47	-1.4
3,120,314	-		Echvi_2632	0.47	-2.4
3,120,314	-		Echvi_2632	0.47	-1.4
3,120,381	+		Echvi_2632	0.56	-0.2
3,120,381	+		Echvi_2632	0.56	-1.9
3,120,384	+		Echvi_2632	0.56	-1.5
3,120,399	+		Echvi_2632	0.58	-1.4