Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2531

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
3,004,657	+		Echvi_2530	0.49	-1.4
3,004,796	-		Echvi_2530	0.60	+0.1
3,004,799	-		Echvi_2530	0.60	-0.6
3,004,799	-		Echvi_2530	0.60	-0.7
3,004,809	-		Echvi_2530	0.61	-1.0
3,004,928	+		Echvi_2530	0.70	+1.2
3,004,929	-		Echvi_2530	0.70	+0.8
3,004,942	-		Echvi_2530	0.71	+0.5
3,004,951	+		Echvi_2530	0.72	-0.4
3,004,951	+		Echvi_2530	0.72	+2.1
3,004,951	+		Echvi_2530	0.72	-0.6
3,004,952	-		Echvi_2530	0.72	-0.4
3,004,952	-		Echvi_2530	0.72	-1.2
3,004,952	-		Echvi_2530	0.72	-1.6
3,004,952	-		Echvi_2530	0.72	+0.6
3,004,952	-		Echvi_2530	0.72	-1.0
3,004,986	-		Echvi_2530	0.74	-0.5
3,005,032	+		Echvi_2530	0.78	-0.4
3,005,033	-		Echvi_2530	0.78	+0.1
3,005,033	-		Echvi_2530	0.78	+0.7
3,005,116	+		Echvi_2530	0.84	-2.9
3,005,143	+		Echvi_2530	0.86	+0.7
3,005,144	-		Echvi_2530	0.86	+0.6
3,005,211	+				-0.7
3,005,255	-				-1.2
3,005,274	+				-0.6
3,005,274	+				-0.3
3,005,274	+				+0.8
3,005,275	-				-0.1
3,005,319	-				+0.5
3,005,323	+				+2.1
3,005,324	-				-0.8
3,005,324	-				-0.7
3,005,324	-				-0.0
3,005,340	+				-0.3
3,005,341	-				-0.2
3,005,341	-				-0.6
3,005,429	-				-0.5
3,005,433	-				-0.0
3,005,433	-				+0.5
3,005,486	-				-1.0
3,005,499	-				-1.0
3,005,501	-				-0.8
3,005,507	-				-0.2
3,005,546	+				-0.0
3,005,547	-				+0.1
3,005,552	+				-1.3
3,005,553	-				+0.0
3,005,553	-				+1.1
3,007,917	-				-0.2
3,007,927	-				-1.7
3,008,024	+				+0.4
3,008,024	+				-0.3
3,008,189	+		Echvi_2532	0.25	-1.1
3,008,190	-		Echvi_2532	0.25	+0.3
3,008,227	-		Echvi_2532	0.32	+1.0
3,008,247	-		Echvi_2532	0.35	+0.1
3,008,259	+		Echvi_2532	0.37	-0.1
3,008,259	+		Echvi_2532	0.37	+0.1
3,008,259	+		Echvi_2532	0.37	-1.1
3,008,260	-		Echvi_2532	0.37	+0.4
3,008,262	-		Echvi_2532	0.38	+0.3
3,008,262	-		Echvi_2532	0.38	+0.2
3,008,279	-		Echvi_2532	0.40	+2.9
3,008,279	-		Echvi_2532	0.40	-0.6
3,008,287	+		Echvi_2532	0.42	+0.5
3,008,305	+		Echvi_2532	0.45	+0.9
3,008,306	-		Echvi_2532	0.45	-0.1
3,008,309	+		Echvi_2532	0.46	+0.1
3,008,327	-		Echvi_2532	0.49	-0.1
3,008,361	+		Echvi_2532	0.54	-0.7
3,008,444	+		Echvi_2532	0.68	-0.1
3,008,444	+		Echvi_2532	0.68	+0.9
3,008,445	-		Echvi_2532	0.69	+2.1
3,008,445	-		Echvi_2532	0.69	+0.1
3,008,462	+		Echvi_2532	0.71	-0.8
3,008,462	+		Echvi_2532	0.71	-1.5
3,008,462	+		Echvi_2532	0.71	+0.0
3,008,463	-		Echvi_2532	0.72	-0.1
3,008,477	+		Echvi_2532	0.74	-1.0
3,008,478	-		Echvi_2532	0.74	-0.6
3,008,478	-		Echvi_2532	0.74	-0.5
3,008,478	-		Echvi_2532	0.74	+0.2
3,008,489	+		Echvi_2532	0.76	-1.8
3,008,499	+		Echvi_2532	0.78	-1.2
3,008,499	+		Echvi_2532	0.78	+1.1
3,008,499	+		Echvi_2532	0.78	+1.2
3,008,500	-		Echvi_2532	0.78	-0.7
3,008,501	+		Echvi_2532	0.78	-1.1
3,008,502	-		Echvi_2532	0.78	-0.6
3,008,562	-				+1.1
3,008,597	-				+2.1
3,008,676	+				-0.7
3,008,686	+				-2.2
3,008,710	+				+1.8
3,008,711	-		Echvi_2533	0.10	-0.5
3,008,711	-		Echvi_2533	0.10	+0.2
3,008,711	-		Echvi_2533	0.10	-0.1
3,008,741	+		Echvi_2533	0.14	-0.2
3,008,741	+		Echvi_2533	0.14	-1.1
3,008,742	-		Echvi_2533	0.14	+1.4
3,008,742	-		Echvi_2533	0.14	+0.7
3,008,742	-		Echvi_2533	0.14	-0.5
3,008,742	-		Echvi_2533	0.14	-0.5
3,008,742	-		Echvi_2533	0.14	-0.0
3,008,743	+				+4.1
3,008,743	+		Echvi_2533	0.14	-1.2
3,008,744	-		Echvi_2533	0.15	+0.3
3,008,744	-		Echvi_2533	0.15	-1.1
3,008,744	-		Echvi_2533	0.15	-0.2
3,008,747	+		Echvi_2533	0.15	+0.9
3,008,780	-		Echvi_2533	0.20	+1.1
3,008,786	+		Echvi_2533	0.20	-0.2
3,008,787	-		Echvi_2533	0.21	-0.1
3,008,787	-		Echvi_2533	0.21	-0.5
3,008,787	-		Echvi_2533	0.21	-0.3