Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2461

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
2,920,507	+		Echvi_2460	0.25	-2.1
2,920,507	+		Echvi_2460	0.25	+0.4
2,920,507	+		Echvi_2460	0.25	-0.3
2,920,507	+		Echvi_2460	0.25	-0.4
2,920,508	-		Echvi_2460	0.25	+1.3
2,920,584	+		Echvi_2460	0.34	-0.2
2,920,662	-		Echvi_2460	0.43	-0.4
2,920,717	-		Echvi_2460	0.49	+0.8
2,920,757	+		Echvi_2460	0.54	+0.5
2,920,758	-		Echvi_2460	0.54	+0.1
2,920,770	-		Echvi_2460	0.55	-0.5
2,920,814	+		Echvi_2460	0.61	-0.2
2,920,815	-		Echvi_2460	0.61	-0.7
2,920,927	-		Echvi_2460	0.74	+0.5
2,921,005	+		Echvi_2460	0.83	+0.4
2,921,110	-				-0.5
2,921,110	-				+0.1
2,921,144	+				+0.2
2,921,170	+				-0.1
2,921,176	+				-0.5
2,921,176	+				-0.2
2,921,227	+				+1.0
2,921,228	-				+0.7
2,921,248	+				+0.4
2,921,248	+				-0.0
2,921,248	+				+0.2
2,921,248	+				-0.0
2,921,249	-				+1.1
2,921,253	-				+0.9
2,921,255	+				+0.1
2,921,256	-				+1.4
2,921,432	-				+0.1
2,921,503	-				-0.6
2,921,503	-				-2.0
2,921,555	-		Echvi_2461	0.10	+0.3
2,921,681	+		Echvi_2461	0.20	+0.2
2,921,681	+		Echvi_2461	0.20	-0.2
2,921,682	-		Echvi_2461	0.20	-1.0
2,921,682	-		Echvi_2461	0.20	+0.9
2,921,693	+		Echvi_2461	0.21	+1.1
2,921,695	+		Echvi_2461	0.21	+0.6
2,921,695	+		Echvi_2461	0.21	-1.7
2,921,696	-		Echvi_2461	0.21	-0.8
2,921,786	-		Echvi_2461	0.29	+0.1
2,921,793	+		Echvi_2461	0.29	+1.0
2,921,793	+		Echvi_2461	0.29	+0.4
2,921,795	+		Echvi_2461	0.29	+0.7
2,921,796	-		Echvi_2461	0.29	-0.9
2,921,926	-		Echvi_2461	0.40	+3.1
2,921,926	-		Echvi_2461	0.40	+0.7
2,921,993	+		Echvi_2461	0.45	+0.4
2,921,999	+		Echvi_2461	0.46	+1.9
2,922,005	+		Echvi_2461	0.46	+0.3
2,922,054	-		Echvi_2461	0.50	-0.5
2,922,131	+		Echvi_2461	0.56	+0.9
2,922,132	-		Echvi_2461	0.57	+0.1
2,922,145	+		Echvi_2461	0.58	+0.8
2,922,172	+		Echvi_2461	0.60	-0.3
2,922,241	-		Echvi_2461	0.65	-0.5
2,922,262	+		Echvi_2461	0.67	+1.5
2,922,262	+		Echvi_2461	0.67	+1.8
2,922,262	+		Echvi_2461	0.67	+0.3
2,922,262	+		Echvi_2461	0.67	+0.6
2,922,263	-		Echvi_2461	0.67	-0.8
2,922,263	-		Echvi_2461	0.67	-0.0
2,922,263	-		Echvi_2461	0.67	-0.0
2,922,263	-		Echvi_2461	0.67	-1.2
2,922,263	-		Echvi_2461	0.67	-0.8
2,922,263	-		Echvi_2461	0.67	+1.8
2,922,364	-		Echvi_2461	0.75	-0.5
2,922,374	+		Echvi_2461	0.76	+0.6
2,922,374	+		Echvi_2461	0.76	-0.5
2,922,375	-		Echvi_2461	0.76	+1.2
2,922,381	+		Echvi_2461	0.77	-1.3
2,922,382	-		Echvi_2461	0.77	+1.7
2,922,475	+		Echvi_2461	0.84	+0.6
2,922,546	+		Echvi_2461	0.90	-2.1
2,922,555	+				-0.9
2,922,651	+				-1.2
2,922,651	+				+1.8
2,922,652	-				-0.4
2,922,652	-				-1.2
2,922,671	+				-0.7
2,922,701	+				+0.7
2,922,701	+				-0.0
2,922,701	+				+0.1
2,922,739	-				+0.2
2,922,739	-				-0.0
2,922,739	-				+1.1
2,922,739	-				-0.1
2,922,739	-				+0.2
2,922,804	+				+0.3
2,922,804	+				+0.3
2,922,875	+		Echvi_2462	0.46	-0.1
2,922,880	-		Echvi_2462	0.48	-0.6
2,922,886	+		Echvi_2462	0.52	+1.4
2,922,919	+		Echvi_2462	0.70	-0.5
2,922,919	+		Echvi_2462	0.70	+0.5
2,922,919	+		Echvi_2462	0.70	-1.3
2,922,919	+		Echvi_2462	0.70	+0.2
2,922,920	-		Echvi_2462	0.71	+0.1
2,922,920	-		Echvi_2462	0.71	+0.4
2,922,920	-		Echvi_2462	0.71	+0.4
2,922,962	-				+0.2
2,922,965	-				+1.5
2,922,965	-				+1.4
2,922,970	+				-0.6
2,922,995	+				+0.7
2,922,995	+				+0.3
2,922,996	-				-0.2
2,922,996	-				+0.3
2,923,009	-				+2.1
2,923,009	-				-0.0
2,923,076	+				-0.3
2,923,187	+				-0.6
2,923,199	-				-0.2
2,923,206	+				+1.4
2,923,207	-				-0.5
2,923,241	+				+1.0
2,923,241	+				-0.3
2,923,364	-				+0.6
2,923,464	+		Echvi_2463	0.34	+1.5
2,923,485	+		Echvi_2463	0.40	+2.1
2,923,622	-		Echvi_2463	0.78	+0.8
2,923,645	+		Echvi_2463	0.84	+0.3