Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2408

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
2,849,983	+				+0.9
2,849,984	-				-1.9
2,850,004	+				-1.0
2,850,005	-				-2.4
2,850,005	-				-0.1
2,850,005	-				-0.2
2,850,005	-				+0.4
2,850,007	+				-0.7
2,850,007	+				-1.1
2,850,007	+				+0.2
2,850,008	-				+0.4
2,850,008	-				-0.2
2,850,046	+				+1.3
2,850,098	+				-0.7
2,850,099	-				-0.8
2,850,103	+				-0.4
2,850,276	+		Echvi_2407	0.23	+0.1
2,850,276	+		Echvi_2407	0.23	+1.5
2,850,291	-		Echvi_2407	0.25	-1.4
2,850,291	-		Echvi_2407	0.25	+1.0
2,850,291	-		Echvi_2407	0.25	-0.6
2,850,293	+		Echvi_2407	0.25	-1.9
2,850,463	+		Echvi_2407	0.47	+0.8
2,850,463	+		Echvi_2407	0.47	-1.2
2,850,464	-		Echvi_2407	0.47	-0.8
2,850,546	+		Echvi_2407	0.57	+0.9
2,850,546	+		Echvi_2407	0.57	+0.5
2,850,579	-		Echvi_2407	0.62	-1.6
2,850,616	+		Echvi_2407	0.66	-0.8
2,850,616	+		Echvi_2407	0.66	+0.3
2,850,638	-		Echvi_2407	0.69	+0.1
2,850,705	+		Echvi_2407	0.78	+0.6
2,850,706	-		Echvi_2407	0.78	+1.4
2,850,738	+		Echvi_2407	0.82	-0.3
2,850,791	-		Echvi_2407	0.89	+0.9
2,850,799	+		Echvi_2407	0.90	-0.8
2,850,799	+				+1.5
2,850,799	+		Echvi_2407	0.90	+1.0
2,850,800	-		Echvi_2407	0.90	+0.3
2,850,810	-				-0.5
2,850,811	+				+1.1
2,850,811	+				+0.3
2,850,831	+				-1.2
2,850,831	+				+0.3
2,850,831	+				+1.1
2,850,832	-				+0.5
2,850,869	-				-1.2
2,850,880	-				+0.1
2,850,905	+				+0.5
2,850,906	-				-0.2
2,850,906	-				+2.2
2,850,957	-				-0.4
2,851,021	-				+0.1
2,851,032	+				-0.4
2,851,033	-				+0.7
2,851,033	-				-0.3
2,851,041	-				+0.6
2,851,065	+				+0.0
2,851,066	-				+0.2
2,851,074	-				+0.6
2,851,147	-		Echvi_2408	0.14	+1.7
2,851,171	-		Echvi_2408	0.16	+0.4
2,851,199	-		Echvi_2408	0.18	+1.5
2,851,262	+		Echvi_2408	0.24	+0.0
2,851,377	+		Echvi_2408	0.33	+0.9
2,851,398	+		Echvi_2408	0.35	-0.4
2,851,465	-		Echvi_2408	0.41	-1.7
2,851,500	+		Echvi_2408	0.44	-1.9
2,851,713	+		Echvi_2408	0.61	+3.1
2,851,838	-		Echvi_2408	0.72	+0.3
2,851,847	-		Echvi_2408	0.73	-0.2
2,852,026	+		Echvi_2408	0.88	+0.8
2,852,027	-		Echvi_2408	0.88	+0.4
2,852,088	-				+0.2
2,852,175	-				-0.8
2,852,182	-				+0.6
2,852,187	-				-1.1
2,852,226	+				-1.5
2,852,226	+				+0.1
2,852,226	+				-0.2
2,852,250	+				-0.3
2,852,250	+				+0.6
2,852,251	-				+0.6
2,852,310	+				+0.3
2,852,338	+				+0.5
2,852,356	+				+1.3
2,852,357	-				+0.1
2,852,357	-				+0.4
2,852,359	+				+0.7
2,852,359	+				+0.9
2,852,370	+				-0.5
2,852,378	+				+1.5
2,852,378	+				+0.4
2,852,427	+				+0.3
2,852,427	+				-0.2
2,852,429	+				+1.3
2,852,429	+				+0.5
2,852,438	+				-2.0
2,852,445	-				-0.2
2,852,456	+				+0.9
2,852,534	+		Echvi_2409	0.23	+2.3
2,852,536	+		Echvi_2409	0.23	+0.7
2,852,617	+		Echvi_2409	0.40	+0.9
2,852,618	-		Echvi_2409	0.41	+0.1
2,852,704	+		Echvi_2409	0.59	+0.4
2,852,704	+		Echvi_2409	0.59	-1.2
2,852,704	+		Echvi_2409	0.59	+0.2
2,852,705	-		Echvi_2409	0.60	+2.2
2,852,705	-		Echvi_2409	0.60	+0.8
2,852,705	-		Echvi_2409	0.60	-1.1
2,852,772	+		Echvi_2409	0.74	+0.3
2,852,772	+		Echvi_2409	0.74	+0.9
2,852,773	-		Echvi_2409	0.74	+1.3
2,852,775	-		Echvi_2409	0.75	-0.4
2,852,804	+		Echvi_2409	0.81	-1.6
2,852,804	+		Echvi_2409	0.81	+0.2
2,852,804	+		Echvi_2409	0.81	+0.6
2,852,804	+		Echvi_2409	0.81	+0.1
2,852,804	+		Echvi_2409	0.81	+0.9
2,852,804	+		Echvi_2409	0.81	-0.5
2,852,805	-		Echvi_2409	0.81	+2.1
2,852,805	-		Echvi_2409	0.81	+0.0
2,852,805	-		Echvi_2409	0.81	+0.9
2,852,805	-		Echvi_2409	0.81	+1.1
2,852,805	-		Echvi_2409	0.81	-1.4
2,852,808	+		Echvi_2409	0.82	-0.3
2,852,809	-		Echvi_2409	0.82	+1.1
2,852,853	+				+0.4
2,852,870	+				+0.8
2,852,881	+				-0.4
2,853,002	+		Echvi_2410	0.25	+1.4
2,853,003	-		Echvi_2410	0.25	-0.7
2,853,003	-		Echvi_2410	0.25	+1.2
2,853,023	-		Echvi_2410	0.29	-0.3
2,853,074	-		Echvi_2410	0.40	-1.1
2,853,083	+		Echvi_2410	0.42	-0.6
2,853,108	-		Echvi_2410	0.48	-0.2
2,853,174	+		Echvi_2410	0.62	+0.5