Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2405

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
2,845,985	+				+0.2
2,846,008	-				+0.5
2,846,011	+				+3.1
2,846,011	+				+1.9
2,846,011	+				+1.0
2,846,012	-				+1.0
2,846,012	-				+1.2
2,846,012	-				+1.4
2,846,023	+				+1.8
2,846,023	+				+1.5
2,846,023	+				+1.8
2,846,023	+				+1.5
2,846,024	-				+1.2
2,846,024	-				+1.2
2,846,024	-				+0.6
2,846,071	-				+1.4
2,846,086	+				+2.0
2,846,089	+		Echvi_2404	0.10	+2.3
2,846,147	+		Echvi_2404	0.18	+1.9
2,846,148	-		Echvi_2404	0.18	+1.5
2,846,186	-		Echvi_2404	0.24	+1.6
2,846,258	+		Echvi_2404	0.34	+1.4
2,846,258	+		Echvi_2404	0.34	+2.3
2,846,258	+		Echvi_2404	0.34	+1.3
2,846,415	+		Echvi_2404	0.56	-0.2
2,846,415	+		Echvi_2404	0.56	+1.0
2,846,415	+		Echvi_2404	0.56	+1.9
2,846,416	-		Echvi_2404	0.56	+1.1
2,846,442	-		Echvi_2404	0.60	+1.4
2,846,457	+		Echvi_2404	0.62	+0.7
2,846,457	+		Echvi_2404	0.62	+2.1
2,846,457	+		Echvi_2404	0.62	+1.6
2,846,457	+		Echvi_2404	0.62	+0.5
2,846,463	-		Echvi_2404	0.63	+1.4
2,846,477	+		Echvi_2404	0.65	+1.1
2,846,478	-		Echvi_2404	0.65	+0.8
2,846,577	+		Echvi_2404	0.79	+1.8
2,846,577	+		Echvi_2404	0.79	+0.5
2,846,578	-		Echvi_2404	0.79	+1.3
2,846,578	-		Echvi_2404	0.79	+2.5
2,846,578	-		Echvi_2404	0.79	+0.9
2,846,604	+		Echvi_2404	0.82	+2.7
2,846,618	+		Echvi_2404	0.84	+1.8
2,846,618	+		Echvi_2404	0.84	+2.9
2,846,619	-		Echvi_2404	0.85	+1.1
2,846,727	-				+0.8
2,846,727	-				-0.3
2,846,727	-				-0.5
2,846,781	-				-0.3
2,846,790	+				+1.9
2,846,856	-				+1.2
2,846,881	+				+0.8
2,846,915	-				+2.3
2,846,948	+		Echvi_2405	0.11	+2.4
2,846,948	+		Echvi_2405	0.11	+0.9
2,846,972	-		Echvi_2405	0.13	+1.2
2,847,048	+		Echvi_2405	0.18	+0.3
2,847,048	+		Echvi_2405	0.18	+1.9
2,847,048	+		Echvi_2405	0.18	+0.9
2,847,049	-		Echvi_2405	0.18	+2.3
2,847,166	+		Echvi_2405	0.26	+1.6
2,847,166	+		Echvi_2405	0.26	+0.5
2,847,166	+		Echvi_2405	0.26	+0.5
2,847,166	+		Echvi_2405	0.26	+1.6
2,847,166	+		Echvi_2405	0.26	+0.2
2,847,167	-		Echvi_2405	0.26	+1.5
2,847,167	-		Echvi_2405	0.26	+1.7
2,847,168	+		Echvi_2405	0.26	+2.6
2,847,169	-		Echvi_2405	0.26	+2.3
2,847,231	+		Echvi_2405	0.30	+1.2
2,847,231	+		Echvi_2405	0.30	+2.6
2,847,260	+		Echvi_2405	0.32	+1.2
2,847,333	-		Echvi_2405	0.37	+2.8
2,847,333	-		Echvi_2405	0.37	+1.9
2,847,355	-		Echvi_2405	0.39	+0.4
2,847,357	+		Echvi_2405	0.39	+1.6
2,847,376	+		Echvi_2405	0.40	+0.9
2,847,376	+		Echvi_2405	0.40	+1.4
2,847,392	-		Echvi_2405	0.41	+1.5
2,847,392	-		Echvi_2405	0.41	+0.9
2,847,423	+		Echvi_2405	0.43	+1.4
2,847,437	-		Echvi_2405	0.44	+2.4
2,847,438	+		Echvi_2405	0.44	+0.5
2,847,439	-		Echvi_2405	0.44	+1.4
2,847,516	-		Echvi_2405	0.50	+1.9
2,847,570	+		Echvi_2405	0.53	+2.7
2,847,571	-		Echvi_2405	0.54	+1.2
2,847,571	-		Echvi_2405	0.54	-0.1
2,847,571	-		Echvi_2405	0.54	+0.6
2,847,572	+		Echvi_2405	0.54	+2.7
2,847,573	-		Echvi_2405	0.54	+1.0
2,847,600	-		Echvi_2405	0.56	+3.5
2,847,606	+		Echvi_2405	0.56	+1.8
2,847,606	+		Echvi_2405	0.56	+0.6
2,847,606	+				+1.1
2,847,607	-		Echvi_2405	0.56	+1.2
2,847,608	+		Echvi_2405	0.56	+3.2
2,847,608	+		Echvi_2405	0.56	+1.7
2,847,609	-		Echvi_2405	0.56	+1.6
2,847,609	-		Echvi_2405	0.56	+2.1
2,847,609	-		Echvi_2405	0.56	+2.9
2,847,725	-		Echvi_2405	0.64	+1.1
2,847,725	-		Echvi_2405	0.64	+1.2
2,847,725	-		Echvi_2405	0.64	+2.0
2,847,759	+		Echvi_2405	0.66	+1.8
2,847,760	-		Echvi_2405	0.66	+1.5
2,847,773	+		Echvi_2405	0.67	+0.5
2,847,853	-		Echvi_2405	0.73	+1.4
2,847,869	+		Echvi_2405	0.74	+0.9
2,847,960	+		Echvi_2405	0.80	+0.1
2,847,970	-		Echvi_2405	0.81	+1.8
2,847,996	-		Echvi_2405	0.83	+1.7
2,848,015	-		Echvi_2405	0.84	+0.4
2,848,057	+		Echvi_2405	0.87	+0.1
2,848,057	+		Echvi_2405	0.87	-0.0
2,848,106	-				+3.5
2,848,129	+				+2.3
2,848,194	-				+1.0
2,848,209	-				+0.8
2,848,209	-				+1.3
2,848,209	-				+0.9
2,848,209	-				+0.8
2,848,212	-				+2.4
2,848,220	+				-0.5
2,848,231	-				+0.8
2,848,231	-				+0.4
2,848,231	-				+2.8
2,848,269	+				-1.4
2,848,283	+				-0.2
2,848,284	-				+0.6
2,848,284	-				+0.9
2,848,303	+				+0.8
2,848,304	-				+0.2
2,848,304	-				+0.1
2,848,305	+				-0.8
2,848,305	+				-0.3
2,848,306	-				+0.8
2,848,313	-				+0.8
2,848,314	+				-1.6
2,848,314	+				-1.2
2,848,315	-				+0.8
2,848,321	-				+1.7
2,848,321	-				+0.0
2,848,325	+				-0.2
2,848,325	+				-1.1
2,848,326	-				+0.6
2,848,326	-				-0.0
2,848,326	-				+1.1
2,848,326	-				+0.1
2,848,329	-				+0.3
2,848,330	+				-1.7
2,848,330	+				+0.1
2,848,377	+				-1.0
2,848,380	+				-0.9
2,848,381	-				+1.1
2,848,381	-				+0.7
2,848,381	-				+0.2
2,848,391	-				-0.6
2,848,392	+				-2.0
2,848,473	+				-3.3
2,848,473	+				+0.3
2,848,473	+				-2.4
2,848,473	+				-1.6
2,848,474	-				-2.2
2,848,474	-				-0.8
2,848,474	-				-0.6
2,848,476	+				-0.7
2,848,508	+				-0.3
2,848,566	+				+0.5
2,848,567	-				-0.3
2,848,569	+				-0.2
2,848,569	+				-1.2
2,848,570	-				+1.5
2,848,570	-				-1.0
2,848,570	-				-0.8
2,848,589	-				-0.9
2,848,614	+				+0.7
2,848,675	+				+0.0
2,848,676	-				-0.1
2,848,676	-				-0.7
2,848,676	-				-1.0
2,848,676	-				-0.2
2,848,676	-				-0.1
2,848,692	+				-1.2
2,848,692	+				-1.6
2,848,696	+				-1.2
2,848,696	+				-1.5
2,848,697	-				-1.3
2,848,723	+				+0.5
2,848,724	-				-1.5
2,848,726	+				-0.5
2,848,727	-				-0.6
2,848,741	+				+1.1
2,848,741	+				-0.4
2,848,741	+				+0.6
2,848,741	+				-0.4
2,848,741	+				-0.7
2,848,742	-				-0.6
2,848,742	-				-0.9
2,848,743	+				-1.6
2,848,743	+				-0.0
2,848,743	+				-0.6
2,848,743	+				+2.4
2,848,744	-				-1.1
2,848,744	-				-0.4
2,848,787	+				+0.0
2,848,790	+				-1.0
2,848,807	-				+0.6
2,848,815	-				+0.2
2,848,815	-				-0.5
2,848,914	-		Echvi_2406	0.16	-0.4
2,848,914	-		Echvi_2406	0.16	+1.1
2,849,088	+		Echvi_2406	0.31	+0.2
2,849,124	-		Echvi_2406	0.34	-1.6
2,849,149	+		Echvi_2406	0.36	+1.2
2,849,150	-		Echvi_2406	0.36	+0.9
2,849,172	-		Echvi_2406	0.38	-1.7
2,849,172	-		Echvi_2406	0.38	+1.1
2,849,175	-		Echvi_2406	0.39	-0.5
2,849,175	-		Echvi_2406	0.39	+1.4
2,849,181	+		Echvi_2406	0.39	-0.2
2,849,181	+		Echvi_2406	0.39	-1.3
2,849,181	+		Echvi_2406	0.39	-0.5
2,849,181	+		Echvi_2406	0.39	+0.0
2,849,182	-		Echvi_2406	0.39	-1.9
2,849,220	-		Echvi_2406	0.43	-0.4