Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2381

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
2,822,445	+				-0.4
2,822,445	+				+0.2
2,822,445	+				+0.0
2,822,446	-				+0.5
2,822,454	+				+1.1
2,822,465	+				-2.0
2,822,517	+				+0.3
2,822,518	-				+0.3
2,822,518	-				-0.5
2,822,541	-				-0.7
2,822,542	+				+0.3
2,822,543	-				-0.7
2,822,701	+		Echvi_2380	0.24	-1.0
2,822,702	-		Echvi_2380	0.25	-1.0
2,822,778	+		Echvi_2380	0.32	+0.2
2,822,925	+		Echvi_2380	0.47	-0.4
2,822,931	+		Echvi_2380	0.48	+0.3
2,822,963	+		Echvi_2380	0.51	+0.7
2,823,000	-		Echvi_2380	0.55	+0.9
2,823,008	+		Echvi_2380	0.56	+0.3
2,823,051	+		Echvi_2380	0.60	-0.3
2,823,175	+		Echvi_2380	0.72	-0.7
2,823,175	+		Echvi_2380	0.72	+1.4
2,823,237	-		Echvi_2380	0.79	-1.1
2,823,310	+		Echvi_2380	0.86	-0.7
2,823,328	+		Echvi_2380	0.88	+0.1
2,823,329	-		Echvi_2380	0.88	-1.5
2,823,341	+		Echvi_2380	0.89	-0.4
2,823,344	-		Echvi_2380	0.90	-0.3
2,823,438	-				-0.2
2,823,452	-				+0.1
2,823,463	+				-0.7
2,823,463	+				-0.9
2,823,464	-				-0.6
2,823,464	-				+0.4
2,823,514	-		Echvi_2381	0.20	+0.7
2,823,547	+		Echvi_2381	0.29	+0.3
2,823,548	-		Echvi_2381	0.29	+0.7
2,823,548	-		Echvi_2381	0.29	+0.5
2,823,548	-		Echvi_2381	0.29	+0.6
2,823,631	+		Echvi_2381	0.50	-0.4
2,823,673	+		Echvi_2381	0.61	-0.6
2,823,709	-		Echvi_2381	0.71	+1.7
2,823,725	-		Echvi_2381	0.75	-0.9
2,823,725	-		Echvi_2381	0.75	+1.2
2,823,725	-		Echvi_2381	0.75	+0.2
2,823,731	-		Echvi_2381	0.76	+0.2
2,823,776	-		Echvi_2381	0.88	+1.3
2,823,851	-				+0.5
2,823,886	+				+0.8
2,823,888	+				-1.1
2,823,889	-				+1.0
2,824,005	+				-1.5
2,824,006	-				+0.0
2,824,049	+				+0.6
2,824,186	-				+0.3
2,824,265	-				-1.5
2,824,307	+				-0.7
2,824,464	-		Echvi_2382	0.16	-0.7
2,824,708	+		Echvi_2382	0.26	-1.3