Experiment: m.b. Carbenicillin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2227 and Echvi_2228 are separated by 307 nucleotides Echvi_2228 and Echvi_2229 are separated by 114 nucleotides
Echvi_2227: Echvi_2227 - Predicted signal-transduction protein containing cAMP-binding and CBS domains, at 2,650,503 to 2,652,392
_2227
Echvi_2228: Echvi_2228 - haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED, at 2,652,700 to 2,653,362
_2228
Echvi_2229: Echvi_2229 - Lysophospholipase L1 and related esterases, at 2,653,477 to 2,654,226
_2229
Position (kb)
2652
2653
2654 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 2651.789 kb on + strand, within Echvi_2227 at 2651.790 kb on - strand, within Echvi_2227 at 2651.790 kb on - strand, within Echvi_2227 at 2651.790 kb on - strand, within Echvi_2227 at 2651.817 kb on - strand, within Echvi_2227 at 2651.817 kb on - strand, within Echvi_2227 at 2651.924 kb on - strand, within Echvi_2227 at 2651.963 kb on - strand, within Echvi_2227 at 2651.963 kb on - strand, within Echvi_2227 at 2651.963 kb on - strand, within Echvi_2227 at 2651.963 kb on - strand, within Echvi_2227 at 2652.143 kb on + strand, within Echvi_2227 at 2652.193 kb on - strand, within Echvi_2227 at 2652.193 kb on - strand, within Echvi_2227 at 2652.226 kb on + strand at 2652.323 kb on + strand at 2652.324 kb on - strand at 2652.388 kb on - strand at 2652.397 kb on - strand at 2652.451 kb on + strand at 2652.465 kb on + strand at 2652.465 kb on + strand at 2652.506 kb on + strand at 2652.528 kb on + strand at 2652.529 kb on - strand at 2652.541 kb on - strand at 2652.545 kb on - strand at 2652.586 kb on - strand at 2652.633 kb on + strand at 2652.634 kb on - strand at 2652.650 kb on + strand at 2652.650 kb on + strand at 2652.685 kb on - strand at 2652.750 kb on - strand at 2652.750 kb on - strand at 2652.757 kb on - strand at 2652.803 kb on + strand, within Echvi_2228 at 2652.804 kb on - strand, within Echvi_2228 at 2652.864 kb on - strand, within Echvi_2228 at 2652.894 kb on + strand, within Echvi_2228 at 2652.895 kb on - strand, within Echvi_2228 at 2652.895 kb on - strand, within Echvi_2228 at 2652.940 kb on + strand, within Echvi_2228 at 2652.941 kb on - strand, within Echvi_2228 at 2652.953 kb on - strand, within Echvi_2228 at 2652.954 kb on + strand, within Echvi_2228 at 2652.954 kb on + strand, within Echvi_2228 at 2652.954 kb on + strand, within Echvi_2228 at 2652.955 kb on - strand, within Echvi_2228 at 2652.955 kb on - strand, within Echvi_2228 at 2653.094 kb on - strand, within Echvi_2228 at 2653.124 kb on + strand, within Echvi_2228 at 2653.124 kb on + strand, within Echvi_2228 at 2653.125 kb on - strand, within Echvi_2228 at 2653.125 kb on - strand, within Echvi_2228 at 2653.125 kb on - strand, within Echvi_2228 at 2653.130 kb on + strand, within Echvi_2228 at 2653.131 kb on - strand, within Echvi_2228 at 2653.131 kb on - strand, within Echvi_2228 at 2653.155 kb on + strand, within Echvi_2228 at 2653.156 kb on - strand, within Echvi_2228 at 2653.197 kb on + strand, within Echvi_2228 at 2653.300 kb on + strand at 2653.301 kb on - strand at 2653.321 kb on - strand at 2653.331 kb on - strand at 2653.345 kb on - strand at 2653.396 kb on - strand at 2653.396 kb on - strand at 2653.485 kb on + strand at 2653.486 kb on - strand at 2653.602 kb on + strand, within Echvi_2229 at 2653.602 kb on + strand, within Echvi_2229 at 2653.602 kb on + strand, within Echvi_2229 at 2653.603 kb on - strand, within Echvi_2229 at 2653.659 kb on - strand, within Echvi_2229 at 2653.659 kb on - strand, within Echvi_2229 at 2653.693 kb on + strand, within Echvi_2229 at 2653.761 kb on + strand, within Echvi_2229 at 2653.762 kb on - strand, within Echvi_2229 at 2653.762 kb on - strand, within Echvi_2229 at 2653.795 kb on + strand, within Echvi_2229 at 2653.840 kb on - strand, within Echvi_2229 at 2653.842 kb on - strand, within Echvi_2229 at 2653.881 kb on - strand, within Echvi_2229 at 2653.881 kb on - strand, within Echvi_2229 at 2653.974 kb on + strand, within Echvi_2229 at 2653.975 kb on - strand, within Echvi_2229 at 2654.015 kb on + strand, within Echvi_2229 at 2654.051 kb on + strand, within Echvi_2229 at 2654.052 kb on - strand, within Echvi_2229 at 2654.072 kb on + strand, within Echvi_2229 at 2654.073 kb on - strand, within Echvi_2229 at 2654.232 kb on + strand at 2654.233 kb on - strand at 2654.233 kb on - strand at 2654.233 kb on - strand at 2654.233 kb on - strand at 2654.236 kb on + strand at 2654.236 kb on + strand at 2654.286 kb on + strand at 2654.331 kb on + strand at 2654.331 kb on + strand at 2654.332 kb on - strand at 2654.352 kb on + strand at 2654.353 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.2 mg/ml remove 2,651,789 + Echvi_2227 0.68 +0.5 2,651,790 - Echvi_2227 0.68 +1.3 2,651,790 - Echvi_2227 0.68 -0.5 2,651,790 - Echvi_2227 0.68 +1.5 2,651,817 - Echvi_2227 0.70 -0.7 2,651,817 - Echvi_2227 0.70 +0.2 2,651,924 - Echvi_2227 0.75 +0.0 2,651,963 - Echvi_2227 0.77 +4.1 2,651,963 - Echvi_2227 0.77 +0.5 2,651,963 - Echvi_2227 0.77 -1.4 2,651,963 - Echvi_2227 0.77 +0.8 2,652,143 + Echvi_2227 0.87 -0.6 2,652,193 - Echvi_2227 0.89 +1.7 2,652,193 - Echvi_2227 0.89 +0.5 2,652,226 + +1.8 2,652,323 + +0.5 2,652,324 - +2.1 2,652,388 - -0.7 2,652,397 - -1.2 2,652,451 + +0.0 2,652,465 + +0.1 2,652,465 + +0.2 2,652,506 + +0.3 2,652,528 + -0.4 2,652,529 - -0.3 2,652,541 - -0.3 2,652,545 - +0.2 2,652,586 - +0.5 2,652,633 + +0.6 2,652,634 - +0.2 2,652,650 + +1.1 2,652,650 + -0.7 2,652,685 - -0.1 2,652,750 - -0.2 2,652,750 - -1.8 2,652,757 - -1.3 2,652,803 + Echvi_2228 0.16 +0.8 2,652,804 - Echvi_2228 0.16 +0.4 2,652,864 - Echvi_2228 0.25 -1.2 2,652,894 + Echvi_2228 0.29 +0.9 2,652,895 - Echvi_2228 0.29 -0.6 2,652,895 - Echvi_2228 0.29 +1.3 2,652,940 + Echvi_2228 0.36 -0.7 2,652,941 - Echvi_2228 0.36 -2.2 2,652,953 - Echvi_2228 0.38 +0.5 2,652,954 + Echvi_2228 0.38 +0.8 2,652,954 + Echvi_2228 0.38 +0.8 2,652,954 + Echvi_2228 0.38 +0.7 2,652,955 - Echvi_2228 0.38 +0.1 2,652,955 - Echvi_2228 0.38 +0.9 2,653,094 - Echvi_2228 0.59 -0.7 2,653,124 + Echvi_2228 0.64 +0.4 2,653,124 + Echvi_2228 0.64 +0.6 2,653,125 - Echvi_2228 0.64 -0.1 2,653,125 - Echvi_2228 0.64 -1.6 2,653,125 - Echvi_2228 0.64 +0.1 2,653,130 + Echvi_2228 0.65 +0.7 2,653,131 - Echvi_2228 0.65 -0.3 2,653,131 - Echvi_2228 0.65 -0.6 2,653,155 + Echvi_2228 0.69 +0.6 2,653,156 - Echvi_2228 0.69 +3.7 2,653,197 + Echvi_2228 0.75 -0.3 2,653,300 + +0.5 2,653,301 - -0.5 2,653,321 - -0.7 2,653,331 - +0.3 2,653,345 - +2.1 2,653,396 - -0.1 2,653,396 - +0.0 2,653,485 + +1.5 2,653,486 - +0.1 2,653,602 + Echvi_2229 0.17 -0.8 2,653,602 + Echvi_2229 0.17 -2.1 2,653,602 + Echvi_2229 0.17 -0.2 2,653,603 - Echvi_2229 0.17 +1.3 2,653,659 - Echvi_2229 0.24 +0.4 2,653,659 - Echvi_2229 0.24 -0.0 2,653,693 + Echvi_2229 0.29 +1.0 2,653,761 + Echvi_2229 0.38 -0.3 2,653,762 - Echvi_2229 0.38 -1.3 2,653,762 - Echvi_2229 0.38 +0.4 2,653,795 + Echvi_2229 0.42 -0.7 2,653,840 - Echvi_2229 0.48 -0.1 2,653,842 - Echvi_2229 0.49 -0.5 2,653,881 - Echvi_2229 0.54 +0.7 2,653,881 - Echvi_2229 0.54 +0.6 2,653,974 + Echvi_2229 0.66 -0.9 2,653,975 - Echvi_2229 0.66 +1.1 2,654,015 + Echvi_2229 0.72 +0.6 2,654,051 + Echvi_2229 0.77 +0.5 2,654,052 - Echvi_2229 0.77 +1.2 2,654,072 + Echvi_2229 0.79 +0.9 2,654,073 - Echvi_2229 0.79 -0.7 2,654,232 + -0.3 2,654,233 - -0.1 2,654,233 - +0.2 2,654,233 - -0.7 2,654,233 - -0.7 2,654,236 + +0.3 2,654,236 + +1.1 2,654,286 + +1.1 2,654,331 + +3.3 2,654,331 + +1.8 2,654,332 - +0.3 2,654,352 + +0.5 2,654,353 - +0.1
Or see this region's nucleotide sequence