Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2154

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
2,561,464	+		Echvi_2153	0.58	+1.1
2,561,464	+		Echvi_2153	0.58	+0.4
2,561,465	-		Echvi_2153	0.59	-0.6
2,561,465	-		Echvi_2153	0.59	-1.0
2,561,467	+		Echvi_2153	0.59	-0.6
2,561,467	+		Echvi_2153	0.59	+1.1
2,561,467	+		Echvi_2153	0.59	+0.9
2,561,467	+		Echvi_2153	0.59	+1.8
2,561,468	-		Echvi_2153	0.59	-0.4
2,561,468	-		Echvi_2153	0.59	+0.4
2,561,468	-		Echvi_2153	0.59	-2.2
2,561,468	-		Echvi_2153	0.59	-0.3
2,561,504	+		Echvi_2153	0.60	-0.6
2,561,504	+		Echvi_2153	0.60	+0.1
2,561,505	-		Echvi_2153	0.60	+0.0
2,561,563	+		Echvi_2153	0.63	-0.2
2,561,564	-		Echvi_2153	0.63	-2.4
2,561,730	+		Echvi_2153	0.70	+1.1
2,561,809	+		Echvi_2153	0.73	+1.5
2,561,809	+		Echvi_2153	0.73	+0.4
2,561,869	+		Echvi_2153	0.76	+0.6
2,561,869	+		Echvi_2153	0.76	-0.1
2,561,870	-		Echvi_2153	0.76	-0.8
2,561,870	-		Echvi_2153	0.76	-0.1
2,562,008	-		Echvi_2153	0.82	+0.3
2,562,086	+		Echvi_2153	0.85	-1.8
2,562,087	-		Echvi_2153	0.85	-0.9
2,562,101	-		Echvi_2153	0.86	-0.8
2,562,139	+		Echvi_2153	0.87	+0.8
2,562,140	-		Echvi_2153	0.87	+1.7
2,562,142	-		Echvi_2153	0.88	-1.0
2,562,142	-		Echvi_2153	0.88	+0.5
2,562,194	+		Echvi_2153	0.90	-1.0
2,562,195	-		Echvi_2153	0.90	-1.7
2,562,195	-		Echvi_2153	0.90	+0.8
2,562,195	-		Echvi_2153	0.90	+1.9
2,562,275	-				+0.1
2,562,275	-				+0.3
2,562,339	-				+0.3
2,562,377	-				-1.8
2,562,377	-				-0.3
2,562,377	-				-0.8
2,562,382	+				+0.8
2,562,382	+				-0.5
2,562,383	-				+0.3
2,562,391	+				-0.9
2,562,435	-				+1.3
2,562,435	-				-0.5
2,562,452	+				+0.7
2,562,453	-				-0.2
2,562,491	+				+0.6
2,562,494	+				+0.1
2,562,556	+		Echvi_2154	0.14	-0.1
2,562,576	+		Echvi_2154	0.17	-0.7
2,562,647	-		Echvi_2154	0.26	+0.1
2,562,654	-		Echvi_2154	0.27	-0.0
2,562,687	-		Echvi_2154	0.32	-0.5
2,562,741	-		Echvi_2154	0.39	+0.5
2,562,741	-		Echvi_2154	0.39	+0.1
2,562,741	-		Echvi_2154	0.39	-1.3
2,562,756	+		Echvi_2154	0.41	-0.3
2,562,762	+		Echvi_2154	0.42	-0.5
2,562,762	+		Echvi_2154	0.42	-0.5
2,562,762	+		Echvi_2154	0.42	-0.6
2,562,762	+		Echvi_2154	0.42	-0.3
2,562,762	+		Echvi_2154	0.42	+0.1
2,562,763	-		Echvi_2154	0.42	+0.0
2,562,780	+		Echvi_2154	0.44	+0.5
2,562,832	-		Echvi_2154	0.51	+1.3
2,562,835	-		Echvi_2154	0.52	+0.7
2,562,847	-		Echvi_2154	0.53	+0.2
2,562,847	-		Echvi_2154	0.53	+0.5
2,562,888	+		Echvi_2154	0.59	-1.1
2,562,888	+		Echvi_2154	0.59	-0.5
2,562,889	-		Echvi_2154	0.59	-1.7
2,562,889	-		Echvi_2154	0.59	+0.8
2,562,890	+		Echvi_2154	0.59	+0.1
2,562,890	+		Echvi_2154	0.59	-0.4
2,562,891	-		Echvi_2154	0.59	-0.5
2,562,891	-		Echvi_2154	0.59	-1.3
2,562,891	-		Echvi_2154	0.59	+0.1
2,562,923	-		Echvi_2154	0.64	-0.0
2,562,994	+		Echvi_2154	0.73	-0.7
2,563,063	+		Echvi_2154	0.83	-0.1
2,563,063	+		Echvi_2154	0.83	+0.6
2,563,063	+		Echvi_2154	0.83	+0.1
2,563,068	+		Echvi_2154	0.83	-1.7
2,563,140	+				-2.2
2,563,140	+				+0.1
2,563,141	-				-0.8
2,563,174	+				-0.2
2,563,177	+				+0.6
2,563,178	-				-0.1
2,563,191	+				-0.4
2,563,196	-				+0.3
2,563,297	+				+0.1
2,563,298	-				-1.1
2,563,363	+				-2.1
2,563,363	+				-1.8
2,563,369	-				+0.1
2,563,372	-				-0.4
2,563,384	+				-0.5
2,563,429	+				-1.5
2,563,482	-				-0.3
2,563,498	+				-0.4
2,563,499	-				+0.5
2,563,503	-				-2.0
2,563,503	-				-0.1
2,563,531	-				-0.1
2,563,542	+				-1.6
2,563,543	-				-1.2
2,563,661	+				-1.0
2,563,697	+				-0.9
2,563,698	-				-0.3
2,563,698	-				-0.8
2,563,698	-				-0.8
2,563,700	+				-0.9
2,563,737	-				-1.1
2,563,763	+				+0.1
2,563,763	+				-1.4
2,563,841	+		Echvi_2155	0.10	+0.1
2,563,842	-		Echvi_2155	0.10	-0.6
2,563,932	-		Echvi_2155	0.15	-0.7
2,563,936	+		Echvi_2155	0.16	-2.3
2,563,936	+		Echvi_2155	0.16	+0.9
2,563,936	+		Echvi_2155	0.16	-0.5
2,563,937	-		Echvi_2155	0.16	-1.4
2,563,940	+		Echvi_2155	0.16	+0.0
2,563,940	+		Echvi_2155	0.16	+0.4
2,563,940	+		Echvi_2155	0.16	+0.0
2,563,940	+		Echvi_2155	0.16	+3.1
2,563,941	-		Echvi_2155	0.16	+1.1
2,563,941	-		Echvi_2155	0.16	+1.3
2,563,951	-		Echvi_2155	0.17	+0.9
2,563,973	+		Echvi_2155	0.18	+0.3
2,563,974	-		Echvi_2155	0.18	+0.3
2,564,027	-		Echvi_2155	0.21	-1.2
2,564,027	-		Echvi_2155	0.21	-0.3
2,564,052	-		Echvi_2155	0.22	-1.1
2,564,105	-		Echvi_2155	0.26	-2.4
2,564,105	-		Echvi_2155	0.26	-2.0
2,564,121	+		Echvi_2155	0.27	+0.0