Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2124

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
2,508,095	+		Echvi_2123	0.19	-0.8
2,508,151	+		Echvi_2123	0.24	+0.5
2,508,188	+		Echvi_2123	0.28	-0.1
2,508,188	+		Echvi_2123	0.28	+0.9
2,508,188	+		Echvi_2123	0.28	+1.2
2,508,189	-		Echvi_2123	0.28	-0.6
2,508,189	-		Echvi_2123	0.28	+0.7
2,508,239	-		Echvi_2123	0.34	+1.0
2,508,243	+		Echvi_2123	0.34	-1.7
2,508,243	+		Echvi_2123	0.34	-0.7
2,508,310	-		Echvi_2123	0.41	+0.3
2,508,356	+		Echvi_2123	0.46	-0.1
2,508,357	-		Echvi_2123	0.46	+0.7
2,508,357	-		Echvi_2123	0.46	-0.4
2,508,611	-		Echvi_2123	0.73	+0.1
2,508,664	+		Echvi_2123	0.78	+0.3
2,508,664	+		Echvi_2123	0.78	+0.9
2,508,665	-		Echvi_2123	0.78	+0.1
2,508,709	-		Echvi_2123	0.83	-0.3
2,508,709	-		Echvi_2123	0.83	-0.4
2,508,747	+		Echvi_2123	0.87	+0.0
2,508,748	-		Echvi_2123	0.87	-1.1
2,508,871	+				+0.5
2,508,871	+				+0.7
2,508,879	+				-2.2
2,508,879	+				+0.1
2,508,879	+				-0.0
2,508,879	+				-2.6
2,508,879	+				-0.4
2,508,880	-				+0.8
2,508,905	+				-0.9
2,508,927	+				+0.0
2,508,927	+				-0.7
2,508,933	+				-1.4
2,508,934	-				-0.1
2,508,934	-				+0.3
2,508,934	-				-0.4
2,508,971	+				-0.3
2,509,027	+				-0.7
2,509,027	+				-1.0
2,509,027	+				-0.1
2,509,028	-				+0.0
2,509,028	-				+0.5
2,509,028	-				-0.7
2,509,035	+				-0.9
2,509,036	-				+0.6
2,509,036	-				-0.5
2,509,037	+				-0.1
2,509,037	+				-0.7
2,509,038	-				+1.0
2,509,038	-				+0.2
2,509,038	-				-0.7
2,509,178	+		Echvi_2124	0.70	-0.7
2,509,178	+		Echvi_2124	0.70	+3.1
2,509,178	+		Echvi_2124	0.70	+0.6
2,509,178	+		Echvi_2124	0.70	-1.2
2,509,178	+		Echvi_2124	0.70	-0.0
2,509,179	-		Echvi_2124	0.70	+1.3
2,509,179	-		Echvi_2124	0.70	-0.6
2,509,179	-		Echvi_2124	0.70	-1.1
2,509,179	-		Echvi_2124	0.70	-0.3
2,509,179	-		Echvi_2124	0.70	-1.9
2,509,179	-		Echvi_2124	0.70	-0.5
2,509,245	+				-0.1
2,509,259	-				-0.8
2,509,319	+				-0.1
2,509,319	+				+0.2
2,509,319	+				-0.4
2,509,320	-				+1.6
2,509,320	-				+0.8
2,509,320	-				-2.0
2,509,320	-				-0.1
2,509,320	-				+0.8
2,509,320	-				+0.6
2,509,334	-				+1.7
2,509,367	+		Echvi_2125	0.14	+1.6
2,509,424	+		Echvi_2125	0.25	-0.3
2,509,425	-		Echvi_2125	0.26	+0.7
2,509,522	+		Echvi_2125	0.44	-0.2
2,509,558	+		Echvi_2125	0.51	+0.1
2,509,618	+		Echvi_2125	0.63	+1.1
2,509,651	-		Echvi_2125	0.69	+2.1
2,509,718	+		Echvi_2125	0.82	+0.7
2,509,766	+				+0.3
2,509,773	+				+2.5
2,509,773	+				-0.1
2,509,778	-				+0.5
2,509,784	+				-0.2
2,509,785	-				+1.9
2,509,785	-				+0.3
2,509,788	-				+0.4
2,509,802	+				-0.0
2,509,839	+				+0.1
2,509,840	-				-0.3
2,509,851	-				+0.4
2,509,877	-				+2.8
2,509,883	+				+0.2
2,509,926	+				-2.4