Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1918

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
2,251,780	+				-1.1
2,251,796	-				-0.2
2,251,821	+				+0.6
2,251,822	-				-1.6
2,251,822	-				-0.8
2,251,844	+				-0.6
2,251,869	-		Echvi_1916	0.18	+0.0
2,251,889	+		Echvi_1916	0.26	+0.4
2,251,889	+		Echvi_1916	0.26	+0.1
2,251,889	+		Echvi_1916	0.26	+0.7
2,251,932	+		Echvi_1916	0.41	+0.6
2,251,988	-		Echvi_1916	0.62	+0.5
2,251,988	-		Echvi_1916	0.62	+0.3
2,252,080	+				+0.4
2,252,081	-				+1.3
2,252,083	-				+0.3
2,252,083	-				-0.6
2,252,126	+				-0.4
2,252,192	-				-0.7
2,252,309	-		Echvi_1917	0.12	-1.2
2,252,321	-		Echvi_1917	0.14	-1.4
2,252,433	-		Echvi_1917	0.40	+0.3
2,252,449	+		Echvi_1917	0.44	-0.8
2,252,488	-		Echvi_1917	0.53	+0.3
2,252,505	-		Echvi_1917	0.57	+0.6
2,252,510	-		Echvi_1917	0.58	-0.7
2,252,517	-		Echvi_1917	0.60	+0.5
2,252,532	+		Echvi_1917	0.63	+0.6
2,252,533	-		Echvi_1917	0.63	+0.1
2,252,576	+		Echvi_1917	0.73	+0.5
2,252,581	-		Echvi_1917	0.75	+0.5
2,252,658	+				-0.1
2,252,668	+				+1.9
2,252,720	-				+1.2
2,252,894	+		Echvi_1918	0.13	+0.5
2,252,894	+		Echvi_1918	0.13	+0.2
2,252,900	+		Echvi_1918	0.14	-0.1
2,252,900	+		Echvi_1918	0.14	+0.5
2,252,901	-		Echvi_1918	0.14	-0.7
2,252,901	-		Echvi_1918	0.14	-0.6
2,252,901	-		Echvi_1918	0.14	+2.1
2,252,901	-		Echvi_1918	0.14	+0.5
2,252,901	-		Echvi_1918	0.14	-1.3
2,252,901	-		Echvi_1918	0.14	-0.1
2,252,906	+		Echvi_1918	0.14	-0.1
2,252,945	-		Echvi_1918	0.18	+0.1
2,252,950	+		Echvi_1918	0.18	+0.3
2,252,950	+		Echvi_1918	0.18	+0.7
2,252,999	+		Echvi_1918	0.23	-0.5
2,253,057	+		Echvi_1918	0.29	-0.7
2,253,057	+		Echvi_1918	0.29	-1.1
2,253,058	-		Echvi_1918	0.29	-0.4
2,253,058	-		Echvi_1918	0.29	-0.9
2,253,058	-		Echvi_1918	0.29	-0.6
2,253,075	+		Echvi_1918	0.31	-0.4
2,253,076	-		Echvi_1918	0.31	-0.4
2,253,160	+		Echvi_1918	0.39	+0.7
2,253,161	-		Echvi_1918	0.39	+0.1
2,253,161	-		Echvi_1918	0.39	+0.4
2,253,172	+		Echvi_1918	0.40	-0.8
2,253,179	-		Echvi_1918	0.41	-0.7
2,253,179	-		Echvi_1918	0.41	-0.4
2,253,364	+		Echvi_1918	0.59	-1.5
2,253,365	-		Echvi_1918	0.59	-0.0
2,253,365	-		Echvi_1918	0.59	-0.8
2,253,365	-		Echvi_1918	0.59	-1.0
2,253,409	+		Echvi_1918	0.63	-0.9
2,253,410	-		Echvi_1918	0.63	-1.1
2,253,437	-		Echvi_1918	0.66	+0.4
2,253,437	-		Echvi_1918	0.66	-0.8
2,253,460	+		Echvi_1918	0.68	-0.5
2,253,460	+				+0.8
2,253,461	-		Echvi_1918	0.68	-0.1
2,253,467	+		Echvi_1918	0.69	+0.1
2,253,474	-		Echvi_1918	0.69	+0.1
2,253,499	+		Echvi_1918	0.72	-1.1
2,253,500	-		Echvi_1918	0.72	-0.1
2,253,500	-		Echvi_1918	0.72	-0.3
2,253,561	-		Echvi_1918	0.78	+0.4
2,253,576	+		Echvi_1918	0.79	-1.6
2,253,576	+		Echvi_1918	0.79	+1.0
2,253,578	+		Echvi_1918	0.80	-0.9
2,253,579	-		Echvi_1918	0.80	-1.1
2,253,579	-		Echvi_1918	0.80	+0.5
2,253,587	+		Echvi_1918	0.81	-1.1
2,253,670	-		Echvi_1918	0.89	-0.1
2,253,683	+		Echvi_1918	0.90	+1.1
2,253,683	+		Echvi_1918	0.90	-0.2
2,253,683	+		Echvi_1918	0.90	+0.3
2,253,698	+				+1.8
2,253,699	-				+0.3
2,253,699	-				+1.5
2,253,766	+				-2.2
2,253,767	-				-0.1
2,253,797	+				-0.6
2,253,797	+				-0.4
2,253,797	+				-0.8
2,253,798	-				-0.5
2,253,798	-				+0.1
2,253,801	+				-0.9
2,253,802	-				+0.9
2,253,802	-				+0.2
2,253,833	+				+0.6
2,253,860	-				-1.1
2,253,860	-				-0.4
2,253,931	+				+0.9
2,253,931	+				-1.1
2,253,932	-				-1.3
2,253,954	-				-0.7
2,254,080	+				+0.3
2,254,080	+				+1.7
2,254,133	-				-0.6
2,254,148	+				+1.0
2,254,148	+				+2.7
2,254,148	+				+0.0
2,254,149	-				+0.5
2,254,150	+				+0.4
2,254,151	-				+1.1
2,254,207	+				+0.1
2,254,208	-				+0.9
2,254,208	-				+0.5
2,254,214	+				+0.3
2,254,214	+				+2.1
2,254,217	+				+0.9
2,254,217	+				+0.6
2,254,218	-				+0.1
2,254,218	-				-0.9
2,254,218	-				+0.2
2,254,271	+				+0.6
2,254,272	-				+0.0
2,254,272	-				+0.9
2,254,272	-				-1.5
2,254,272	-				-0.6
2,254,316	+		Echvi_1919	0.11	-0.5
2,254,317	-		Echvi_1919	0.11	-0.7
2,254,317	-		Echvi_1919	0.11	-1.3
2,254,400	+		Echvi_1919	0.12	+0.8
2,254,413	+		Echvi_1919	0.13	-0.1
2,254,428	-		Echvi_1919	0.13	+0.5
2,254,448	+		Echvi_1919	0.13	+0.0
2,254,449	-		Echvi_1919	0.13	-0.1
2,254,449	-		Echvi_1919	0.13	+1.0
2,254,457	-		Echvi_1919	0.14	-0.0
2,254,542	+		Echvi_1919	0.15	-0.1
2,254,543	-		Echvi_1919	0.15	-1.2
2,254,592	+		Echvi_1919	0.16	+0.1
2,254,687	+		Echvi_1919	0.18	+0.6
2,254,761	+		Echvi_1919	0.20	-0.5
2,254,761	+		Echvi_1919	0.20	+0.0