Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1897

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
2,223,385	+				+1.3
2,223,386	-				-0.3
2,223,429	+		Echvi_1895	0.19	+0.4
2,223,437	-		Echvi_1895	0.21	+0.6
2,223,437	-		Echvi_1895	0.21	+1.3
2,223,537	+		Echvi_1895	0.45	+0.7
2,223,543	-		Echvi_1895	0.47	+0.3
2,223,547	-		Echvi_1895	0.48	+0.6
2,223,591	+		Echvi_1895	0.58	-0.2
2,223,592	-		Echvi_1895	0.59	+0.5
2,223,651	+		Echvi_1895	0.73	-0.7
2,223,652	-		Echvi_1895	0.73	+0.3
2,223,715	+		Echvi_1895	0.88	+0.2
2,223,753	-				-0.2
2,223,767	-				-0.2
2,223,792	+				-0.6
2,223,793	-				+0.3
2,223,841	+		Echvi_1896	0.24	-0.5
2,223,841	+		Echvi_1896	0.24	-0.8
2,223,846	+		Echvi_1896	0.26	+0.7
2,223,847	-		Echvi_1896	0.26	-0.9
2,223,847	-		Echvi_1896	0.26	+0.2
2,223,924	+		Echvi_1896	0.53	+0.2
2,224,017	-		Echvi_1896	0.85	-1.3
2,224,076	-				+1.5
2,224,090	-				+0.9
2,224,149	+				-0.8
2,224,174	+				+0.2
2,224,187	+				+0.1
2,224,193	+				+0.4
2,224,239	+				-0.8
2,224,240	-				+0.9
2,224,315	+				+0.4
2,224,315	+				-1.2
2,224,316	-				+0.2
2,224,322	-				+1.9
2,224,323	+				-0.4
2,224,323	+				+1.7
2,224,335	-				+1.2
2,224,343	+				-0.4
2,224,343	+				-0.9
2,224,532	-		Echvi_1897	0.31	+2.3
2,224,581	+		Echvi_1897	0.38	+1.1
2,224,586	-		Echvi_1897	0.39	+2.9
2,224,593	+		Echvi_1897	0.40	+1.7
2,224,689	+		Echvi_1897	0.54	+1.9
2,224,690	-		Echvi_1897	0.54	+2.8
2,224,694	-		Echvi_1897	0.55	+3.3
2,224,727	+		Echvi_1897	0.60	+2.3
2,224,727	+		Echvi_1897	0.60	+1.5
2,224,728	-		Echvi_1897	0.60	+2.0
2,224,729	+		Echvi_1897	0.60	+3.3
2,224,729	+		Echvi_1897	0.60	+1.9
2,224,730	-		Echvi_1897	0.60	+2.5
2,224,730	-		Echvi_1897	0.60	+1.3
2,224,730	-		Echvi_1897	0.60	+0.8
2,224,730	-		Echvi_1897	0.60	+2.7
2,224,730	-		Echvi_1897	0.60	+1.3
2,224,905	+		Echvi_1897	0.86	+2.2
2,224,905	+		Echvi_1897	0.86	+1.6
2,224,964	+				+1.3
2,224,984	-				+0.9
2,225,007	+				+3.1
2,225,008	-				-1.1
2,225,022	+				+2.1
2,225,023	-				-1.7
2,225,028	-				-0.4
2,225,039	+				+1.1
2,225,040	-				+1.5
2,225,042	-				+1.0
2,225,051	-				-1.0
2,225,051	-				-0.1
2,225,051	-				-2.2
2,225,063	+				+2.9
2,225,063	+				+1.2
2,225,064	-				-0.1
2,225,102	-				+1.0
2,225,144	+				+2.1
2,225,244	-		Echvi_1898	0.12	+1.3
2,225,244	-		Echvi_1898	0.12	+1.9
2,225,411	+		Echvi_1898	0.21	+1.4
2,225,411	+		Echvi_1898	0.21	+1.6
2,225,451	-		Echvi_1898	0.23	+0.9
2,225,679	-		Echvi_1898	0.36	+1.5
2,225,764	+		Echvi_1898	0.40	+2.3
2,225,920	-		Echvi_1898	0.49	-0.7