Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1863

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
2,182,159	+				-1.6
2,182,160	-				-1.5
2,182,160	-				-1.9
2,182,161	+				-0.5
2,182,161	+				-0.4
2,182,161	+				-0.8
2,182,162	-				-0.5
2,182,162	-				-1.5
2,182,162	-				-1.8
2,182,162	-				+0.5
2,182,162	-				-1.8
2,182,162	-				-2.6
2,182,193	+				-1.1
2,182,194	-				-1.6
2,182,194	-				-2.0
2,182,226	+				-0.7
2,182,226	+				-0.6
2,182,226	+				+0.1
2,182,227	-				+0.1
2,182,227	-				-1.9
2,182,286	+				+2.1
2,182,361	+				+0.3
2,182,361	+				+1.1
2,182,361	+				-0.4
2,182,361	+				-1.1
2,182,361	+				+0.3
2,182,362	-				-0.5
2,182,362	-				+0.7
2,182,386	-		Echvi_1862	0.10	-0.1
2,182,390	+		Echvi_1862	0.11	+0.7
2,182,390	+		Echvi_1862	0.11	-1.0
2,182,391	-		Echvi_1862	0.11	-0.2
2,182,603	-		Echvi_1862	0.40	+0.5
2,182,604	+		Echvi_1862	0.40	-0.4
2,182,689	+		Echvi_1862	0.51	+0.4
2,182,690	-		Echvi_1862	0.51	-1.6
2,182,690	-		Echvi_1862	0.51	-0.1
2,182,694	-		Echvi_1862	0.52	+0.0
2,182,715	-		Echvi_1862	0.55	+1.3
2,182,734	+		Echvi_1862	0.57	-0.1
2,182,735	-		Echvi_1862	0.57	-2.4
2,182,768	+		Echvi_1862	0.62	+0.1
2,182,769	-		Echvi_1862	0.62	-0.6
2,182,769	-		Echvi_1862	0.62	-0.7
2,182,769	-		Echvi_1862	0.62	+0.7
2,182,788	+		Echvi_1862	0.65	-0.0
2,182,810	+		Echvi_1862	0.68	-1.6
2,182,810	+		Echvi_1862	0.68	+0.6
2,182,810	+		Echvi_1862	0.68	-2.3
2,182,810	+		Echvi_1862	0.68	-1.5
2,182,847	-		Echvi_1862	0.73	+0.3
2,182,847	-		Echvi_1862	0.73	-0.4
2,182,889	+		Echvi_1862	0.78	-0.2
2,182,893	-		Echvi_1862	0.79	-0.1
2,182,935	+		Echvi_1862	0.84	+0.1
2,182,953	+		Echvi_1862	0.87	-1.1
2,182,957	-		Echvi_1862	0.87	-0.7
2,182,968	+		Echvi_1862	0.89	+0.4
2,183,073	-				-1.3
2,183,073	-				-1.6
2,183,077	-				+0.7
2,183,103	+				-0.5
2,183,103	+				-0.2
2,183,104	-				-1.0
2,183,104	-				-2.0
2,183,181	+				-1.6
2,183,268	-				+0.3
2,183,380	-		Echvi_1863	0.14	-0.7
2,183,443	-		Echvi_1863	0.17	+0.9
2,183,510	+		Echvi_1863	0.20	+0.6
2,183,510	+		Echvi_1863	0.20	-0.1
2,183,535	+		Echvi_1863	0.21	+1.8
2,183,536	-		Echvi_1863	0.21	-1.5
2,183,538	+		Echvi_1863	0.21	-0.1
2,183,539	-		Echvi_1863	0.21	-1.3
2,183,539	-		Echvi_1863	0.21	+0.5
2,183,614	+		Echvi_1863	0.25	-1.0
2,183,614	+		Echvi_1863	0.25	+0.7
2,183,640	+		Echvi_1863	0.26	-0.9
2,183,646	-		Echvi_1863	0.26	+0.6
2,183,722	+		Echvi_1863	0.30	+2.1
2,183,723	-		Echvi_1863	0.30	-0.8
2,183,787	+		Echvi_1863	0.33	+0.3
2,183,945	+		Echvi_1863	0.40	-0.5
2,183,998	-		Echvi_1863	0.43	+0.5
2,184,156	+		Echvi_1863	0.50	-0.6
2,184,156	+		Echvi_1863	0.50	+0.2
2,184,254	-		Echvi_1863	0.55	+0.9
2,184,348	+		Echvi_1863	0.59	+0.1
2,184,349	-		Echvi_1863	0.59	-2.0
2,184,349	-		Echvi_1863	0.59	+0.3
2,184,462	+		Echvi_1863	0.64	+0.9
2,184,464	+		Echvi_1863	0.64	+0.2
2,184,465	-		Echvi_1863	0.64	-1.2
2,184,465	-		Echvi_1863	0.64	+0.0
2,184,477	+		Echvi_1863	0.65	+0.0
2,184,522	+		Echvi_1863	0.67	+1.1
2,184,533	+		Echvi_1863	0.67	+0.4
2,184,533	+		Echvi_1863	0.67	-0.9
2,184,534	-		Echvi_1863	0.67	-1.3
2,184,534	-		Echvi_1863	0.67	-1.0
2,184,551	+				-0.5
2,184,551	+		Echvi_1863	0.68	+0.5
2,184,604	-		Echvi_1863	0.71	-0.6
2,184,612	+		Echvi_1863	0.71	-0.3
2,184,613	-				+0.1
2,184,613	-		Echvi_1863	0.71	+0.3
2,184,655	+		Echvi_1863	0.73	-0.0
2,184,655	+		Echvi_1863	0.73	+0.7
2,184,656	-		Echvi_1863	0.73	+0.1
2,184,681	-		Echvi_1863	0.74	+0.0
2,184,816	-		Echvi_1863	0.80	-2.5
2,184,816	-		Echvi_1863	0.80	+0.7
2,184,853	+		Echvi_1863	0.82	+0.3
2,184,939	-		Echvi_1863	0.86	+0.0
2,184,939	-		Echvi_1863	0.86	-0.3
2,184,939	-		Echvi_1863	0.86	+1.1
2,185,048	+				+0.4
2,185,156	+				+0.7
2,185,156	+				-0.1
2,185,159	-				-0.4
2,185,199	+				+0.5
2,185,200	-				+0.6
2,185,200	-				-0.4
2,185,242	+				+0.8
2,185,242	+				-0.2
2,185,244	+				+0.3
2,185,244	+				+0.2
2,185,244	+				-0.1
2,185,245	-				+0.3
2,185,245	-				+0.1
2,185,245	-				-0.2
2,185,245	-				-1.3
2,185,400	+		Echvi_1864	0.12	-0.9
2,185,400	+		Echvi_1864	0.12	+0.3
2,185,400	+		Echvi_1864	0.12	+0.7
2,185,400	+		Echvi_1864	0.12	+0.2
2,185,475	-		Echvi_1864	0.20	-1.6
2,185,488	-				+2.1
2,185,527	-		Echvi_1864	0.25	+0.3
2,185,606	+		Echvi_1864	0.32	-0.3
2,185,689	-		Echvi_1864	0.40	+0.1
2,185,696	-		Echvi_1864	0.41	-0.7
2,185,696	-		Echvi_1864	0.41	-1.5
2,185,696	-		Echvi_1864	0.41	-1.7
2,185,699	+		Echvi_1864	0.41	+0.5
2,185,699	+		Echvi_1864	0.41	-1.5
2,185,699	+		Echvi_1864	0.41	-1.0
2,185,699	+		Echvi_1864	0.41	-1.7
2,185,699	+		Echvi_1864	0.41	+1.5
2,185,699	+		Echvi_1864	0.41	-0.0
2,185,699	+		Echvi_1864	0.41	+2.5
2,185,699	+		Echvi_1864	0.41	-1.0
2,185,699	+		Echvi_1864	0.41	-0.5
2,185,700	-		Echvi_1864	0.41	-0.6
2,185,700	-		Echvi_1864	0.41	-1.0
2,185,700	-		Echvi_1864	0.41	-0.4
2,185,700	-		Echvi_1864	0.41	-1.0
2,185,700	-		Echvi_1864	0.41	-0.3
2,185,700	-		Echvi_1864	0.41	+0.5
2,185,700	-		Echvi_1864	0.41	-1.6
2,185,700	-		Echvi_1864	0.41	-0.9
2,185,700	-		Echvi_1864	0.41	+0.3
2,185,700	-		Echvi_1864	0.41	+0.8
2,185,700	-		Echvi_1864	0.41	-1.3
2,185,700	-		Echvi_1864	0.41	+0.1
2,185,700	-		Echvi_1864	0.41	+0.5
2,185,700	-		Echvi_1864	0.41	-3.3
2,185,702	-		Echvi_1864	0.42	+0.5
2,185,702	-		Echvi_1864	0.42	-0.8
2,185,710	-		Echvi_1864	0.42	-0.1
2,185,725	-		Echvi_1864	0.44	-2.7
2,185,745	+		Echvi_1864	0.46	-1.6
2,185,921	+		Echvi_1864	0.63	+1.1
2,185,922	-		Echvi_1864	0.63	-1.3
2,185,943	+		Echvi_1864	0.65	+0.4
2,186,029	+		Echvi_1864	0.73	-0.0
2,186,030	-		Echvi_1864	0.73	-1.4
2,186,032	-		Echvi_1864	0.73	+0.6
2,186,032	-		Echvi_1864	0.73	-1.0