Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1632

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
1,884,049	+		Echvi_1631	0.45	+0.3
1,884,064	+		Echvi_1631	0.47	+0.3
1,884,073	+		Echvi_1631	0.47	+0.2
1,884,079	+		Echvi_1631	0.48	+0.3
1,884,101	+		Echvi_1631	0.49	-1.3
1,884,102	-		Echvi_1631	0.49	-0.4
1,884,102	-		Echvi_1631	0.49	+1.3
1,884,155	+		Echvi_1631	0.53	+1.1
1,884,200	-		Echvi_1631	0.57	-0.9
1,884,200	-		Echvi_1631	0.57	-0.3
1,884,224	+		Echvi_1631	0.58	+1.4
1,884,224	+		Echvi_1631	0.58	+1.1
1,884,224	+		Echvi_1631	0.58	+0.5
1,884,224	+		Echvi_1631	0.58	+0.6
1,884,224	+		Echvi_1631	0.58	+0.9
1,884,225	-		Echvi_1631	0.58	-0.7
1,884,227	-		Echvi_1631	0.58	-1.2
1,884,449	+		Echvi_1631	0.75	+1.1
1,884,450	-		Echvi_1631	0.75	+0.4
1,884,450	-		Echvi_1631	0.75	+1.1
1,884,476	+		Echvi_1631	0.77	+1.2
1,884,482	+		Echvi_1631	0.77	+2.1
1,884,482	+		Echvi_1631	0.77	-0.3
1,884,482	+		Echvi_1631	0.77	+0.3
1,884,482	+		Echvi_1631	0.77	-0.4
1,884,482	+		Echvi_1631	0.77	-0.8
1,884,483	-		Echvi_1631	0.77	+0.5
1,884,483	-		Echvi_1631	0.77	+1.8
1,884,483	-		Echvi_1631	0.77	-0.2
1,884,483	-		Echvi_1631	0.77	+1.3
1,884,487	+		Echvi_1631	0.78	-0.1
1,884,531	-		Echvi_1631	0.81	-0.5
1,884,531	-		Echvi_1631	0.81	+0.6
1,884,577	-		Echvi_1631	0.84	+1.4
1,884,641	+		Echvi_1631	0.89	+1.4
1,884,644	+		Echvi_1631	0.89	+0.8
1,884,645	-		Echvi_1631	0.89	+0.1
1,884,645	-		Echvi_1631	0.89	-1.7
1,884,645	-		Echvi_1631	0.89	-2.4
1,884,759	+				+0.9
1,884,760	-				+1.1
1,884,791	+				+0.6
1,884,791	+				+3.4
1,884,791	+				-0.7
1,884,792	-				+1.1
1,884,792	-				+1.6
1,884,792	-				+0.1
1,884,792	-				+0.2
1,884,792	-				+0.2
1,884,835	+				-0.6
1,884,941	+				-1.1
1,884,969	+				+1.2
1,884,969	+				-0.8
1,884,970	-				-0.1
1,885,041	+				-0.4
1,885,042	-				+0.6
1,885,042	-				+0.6
1,885,053	+				+0.3
1,885,054	-				+1.6
1,885,085	+				+0.4
1,885,085	+				-1.2
1,885,086	-				-0.9
1,885,239	+		Echvi_1632	0.21	-2.3
1,885,250	+		Echvi_1632	0.22	+0.1
1,885,251	-		Echvi_1632	0.22	-0.9
1,885,255	+		Echvi_1632	0.22	-2.2
1,885,256	-		Echvi_1632	0.22	+2.6
1,885,473	-		Echvi_1632	0.45	-0.9
1,885,473	-		Echvi_1632	0.45	-0.2
1,885,473	-		Echvi_1632	0.45	+0.1
1,885,477	-		Echvi_1632	0.45	+2.4
1,885,551	+		Echvi_1632	0.53	+0.1
1,885,551	+		Echvi_1632	0.53	-0.5
1,885,551	+		Echvi_1632	0.53	-1.0
1,885,552	-		Echvi_1632	0.53	+2.1
1,885,683	+		Echvi_1632	0.66	-0.8
1,885,683	+		Echvi_1632	0.66	-0.6
1,885,683	+		Echvi_1632	0.66	+0.6
1,885,684	-		Echvi_1632	0.66	-1.0
1,885,685	+		Echvi_1632	0.67	-0.4
1,885,686	-		Echvi_1632	0.67	-0.9
1,885,686	-		Echvi_1632	0.67	+0.2
1,885,698	+		Echvi_1632	0.68	-1.2
1,885,960	+				+0.1
1,885,990	-				-1.0
1,885,994	-				-0.7
1,885,994	-				+0.1
1,886,083	+				+1.1
1,886,084	-				-0.1
1,886,086	-				-1.5
1,886,140	-				-0.9
1,886,223	+				-0.8
1,886,224	-				-0.7
1,886,224	-				+1.5
1,886,225	+				+1.5
1,886,225	+				-0.5
1,886,238	+				-0.1
1,886,262	+				-0.0
1,886,262	+				-0.9
1,886,270	+				-1.3
1,886,271	-				+0.5
1,886,325	+				-0.2
1,886,413	+				-0.5
1,886,471	+				+0.1
1,886,585	+				-0.5
1,886,732	+				-1.3
1,886,732	+				-0.7
1,886,732	+				+0.2
1,886,732	+				-0.3
1,886,733	-				-0.4
1,886,738	-				-2.3
1,886,784	-				-0.1
1,886,784	-				-2.3
1,886,832	+				-0.8
1,886,832	+				-0.5
1,886,836	+				-0.1
1,886,836	+				+0.4
1,886,837	-				-1.2
1,886,844	+				-0.9
1,886,845	-				+0.1
1,886,845	-				+0.1
1,886,845	-				+0.1
1,886,951	+				+0.5
1,886,975	+				-0.2
1,887,009	-				+0.4
1,887,009	-				-2.0